RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 NEFHP12036 1026 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 ACOT2P49753 483 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 BPIFB4P59827 614 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 DNAJC3Q13217 504 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 HHATQ5VTY9 493 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 C4orf33Q8N1A6 199 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 SLC17A8Q8NDX2 589 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 BSNDQ8WZ55 320 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 FAM212AQ96EL1 285 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 FAM81BQ96LP2 452 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 NOP53Q9NZM5 478 aaKnown RBP10.09□□□□□ -0.79
SYNE2-213ENST00000554805 PCDHB2Q9Y5E7 798 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 RBBP6Q7Z6E9 1792 aaKnown RBP10.09□□□□□ -0.79
SYNE2-213ENST00000554805 SPDYE2BA6NHP3 402 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 GOLGA8SH3BPF8 625 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 GOLGA8MH3BSY2 632 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 PROSCO94903 275 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 HLA-DRAP01903 254 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 KRT1P04264 644 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 ZSCAN5DPP0CG00 497 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 SPDYE6P0CI01 402 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 JAK3P52333 1124 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 TAS2R40P59535 323 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 FKBP1AP62942 108 aaKnown RBP10.09□□□□□ -0.79
SYNE2-213ENST00000554805 DGKZQ13574 1117 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 STAT4Q14765 748 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 SWSAP1Q6NVH7 229 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 DCUN1D2Q6PH85 259 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 C4orf19Q8IY42 314 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 LARGE2Q8N3Y3 721 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 TMC2Q8TDI7 906 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 RMDN2Q96LZ7 410 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 ATP6V0A4Q9HBG4 840 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 CEP83Q9Y592 693 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 UBIAD1Q9Y5Z9 338 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 MROH7Q68CQ1 1323 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 MAPK13O15264 365 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 KRT16P08779 473 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 CETPP11597 493 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 NCKAP1LP55160 1127 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 SNRPFP62306 86 aaKnown RBP10.09□□□□□ -0.79
SYNE2-213ENST00000554805 GPS1Q13098 491 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 MTERF2Q49AM1 385 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 ATP13A4Q4VNC1 1196 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 MAP4K3Q8IVH8 894 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 FITM2Q8N6M3 262 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 MAGEC3Q8TD91 643 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 ACSF2Q96CM8 615 aaPredicted RBP10.09□□□□□ -0.79
SYNE2-213ENST00000554805 CFAP57Q96MR6 1250 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 ANKFY1Q9P2R3 1169 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 SUFUQ9UMX1 484 aa10.09□□□□□ -0.79
SYNE2-213ENST00000554805 WDR91A4D1P6 747 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 FAM47DPA6NHR8 397 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 ASNSP08243 561 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 CA4P22748 312 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 HSD17B4P51659 736 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 KRT76Q01546 638 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 ZNF449Q6P9G9 518 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 CCHCR1Q8TD31 782 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 DDX1Q92499 740 aaKnown RBP10.08□□□□□ -0.8
SYNE2-213ENST00000554805 CNKSR1Q969H4 720 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 DDX27Q96GQ7 796 aaKnown RBP10.08□□□□□ -0.8
SYNE2-213ENST00000554805 MRPL47Q9HD33 250 aaKnown RBP10.08□□□□□ -0.8
SYNE2-213ENST00000554805 ATRNL1Q5VV63 1379 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 PLSCR1O15162 318 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 CCNE2O96020 404 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 MYBL1P10243 752 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 GNA15P30679 374 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 ALDH3A1P30838 453 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 ARSEP51690 589 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 CENPCQ03188 943 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 MTM1Q13496 603 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 PCNX4Q63HM2 1172 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 RHBDF2Q6PJF5 856 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 ENOSF1Q7L5Y1 443 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 LRRC8CQ8TDW0 803 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 ERP27Q96DN0 273 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 MAGEB18Q96M61 343 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 SMC6Q96SB8 1091 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 TIPINQ9BVW5 301 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 TRABDQ9H4I3 376 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 RXFP1Q9HBX9 757 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 ANKEF1Q9NU02 776 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 SYNPO2Q9UMS6 1093 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 NEU2Q9Y3R4 380 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 LRRIQ4A6NIV6 560 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 EIF4E1BA6NMX2 242 aaKnown RBP10.08□□□□□ -0.8
SYNE2-213ENST00000554805 YDJCA8MPS7 323 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 ATP2A1O14983 1001 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 CFHP08603 1231 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 ETS1P14921 441 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 IVDP26440 423 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 MSH2P43246 934 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 DYNLT1P63172 113 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 MKRN3Q13064 507 aaKnown RBP10.08□□□□□ -0.8
SYNE2-213ENST00000554805 CCNG2Q16589 344 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 ZNF394Q53GI3 561 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 ANO5Q75V66 913 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 TEX2Q8IWB9 1127 aa10.08□□□□□ -0.8
SYNE2-213ENST00000554805 CNKSR2Q8WXI2 1034 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms