RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 NLRC4Q9NPP4 1024 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 TUBGCP4Q9UGJ1 667 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 SIX4Q9UIU6 781 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 AGAP1Q9UPQ3 857 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 FHOD1Q9Y613 1164 aa15.45■□□□□ 0.06
SHOX2-206ENST00000554685 BRCA2P51587 3418 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.44■□□□□ 0.06
SHOX2-206ENST00000554685 MEIS3P2A8K0S8 358 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 EPHB6O15197 1021 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 CST3P01034 146 aaPredicted RBP15.44■□□□□ 0.06
SHOX2-206ENST00000554685 ITGB8P26012 769 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 RPL9P32969 192 aaKnown RBP15.44■□□□□ 0.06
SHOX2-206ENST00000554685 STAT1P42224 750 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 LRMPQ12912 555 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 ARID5BQ14865 1188 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 HS1BP3Q53T59 392 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 ZNF667Q5HYK9 610 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 IQCEQ6IPM2 695 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 PHLDB3Q6NSJ2 640 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 DPY19L2P1Q6NXN4 242 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 PDXDC1Q6P996 788 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 RRAGAQ7L523 313 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 TTC39CQ8N584 583 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 TC2NQ8N9U0 490 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 GSTCDQ8NEC7 633 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 BAP1Q92560 729 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 SYN2Q92777 582 aaPredicted RBP15.44■□□□□ 0.06
SHOX2-206ENST00000554685 C18orf25Q96B23 403 aaPredicted RBP15.44■□□□□ 0.06
SHOX2-206ENST00000554685 DDX27Q96GQ7 796 aaKnown RBP15.44■□□□□ 0.06
SHOX2-206ENST00000554685 FAM84AQ96KN4 292 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 DNAJC7Q99615 494 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 NAA15Q9BXJ9 866 aaKnown RBP15.44■□□□□ 0.06
SHOX2-206ENST00000554685 NIF3L1Q9GZT8 377 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 FAM124BQ9H5Z6 455 aaPredicted RBP15.44■□□□□ 0.06
SHOX2-206ENST00000554685 ABHD10Q9NUJ1 306 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 INPP5FQ9Y2H2 1132 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 ANK1P16157 1881 aa15.44■□□□□ 0.06
SHOX2-206ENST00000554685 ANO9A1A5B4 782 aa15.43■□□□□ 0.06
SHOX2-206ENST00000554685 KCNJ6P48051 423 aa15.43■□□□□ 0.06
SHOX2-206ENST00000554685 ADKP55263 362 aaKnown RBP15.43■□□□□ 0.06
SHOX2-206ENST00000554685 TNNC1P63316 161 aa15.43■□□□□ 0.06
SHOX2-206ENST00000554685 TUSC3Q13454 348 aa15.43■□□□□ 0.06
SHOX2-206ENST00000554685 TCTN1Q2MV58 587 aa15.43■□□□□ 0.06
SHOX2-206ENST00000554685 SV2CQ496J9 727 aa15.43■□□□□ 0.06
SHOX2-206ENST00000554685 SFMBT2Q5VUG0 894 aa15.43■□□□□ 0.06
SHOX2-206ENST00000554685 C9orf57Q5W0N0 161 aa15.43■□□□□ 0.06
SHOX2-206ENST00000554685 PSRC1Q6PGN9 363 aaPredicted RBP15.43■□□□□ 0.06
SHOX2-206ENST00000554685 ARHGEF19Q8IW93 802 aa15.43■□□□□ 0.06
SHOX2-206ENST00000554685 CXorf38Q8TB03 319 aa15.43■□□□□ 0.06
SHOX2-206ENST00000554685 HELQQ8TDG4 1101 aa15.43■□□□□ 0.06
SHOX2-206ENST00000554685 HPDLQ96IR7 371 aa15.43■□□□□ 0.06
SHOX2-206ENST00000554685 FAM193BQ96PV7 902 aaPredicted RBP15.43■□□□□ 0.06
SHOX2-206ENST00000554685 LBHD1Q9BQE6 289 aaPredicted RBP15.43■□□□□ 0.06
SHOX2-206ENST00000554685 PI4K2AQ9BTU6 479 aa15.43■□□□□ 0.06
SHOX2-206ENST00000554685 XYLT2Q9H1B5 865 aa15.43■□□□□ 0.06
SHOX2-206ENST00000554685 LRRC53A6NM62 1247 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 PIRO00625 290 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 POMCP01189 267 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 FGBP02675 491 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 FERP16591 822 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 HNRNPH3P31942 346 aaKnown RBP15.42■□□□□ 0.06
SHOX2-206ENST00000554685 TAF6P49848 677 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 GUCY2FP51841 1108 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 JAM2P57087 298 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 APBA1Q02410 837 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 RNASELQ05823 741 aaKnown RBP15.42■□□□□ 0.06
SHOX2-206ENST00000554685 CUL2Q13617 745 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 DRAP1Q14919 205 aaPredicted RBP15.42■□□□□ 0.06
SHOX2-206ENST00000554685 CLLU1OSQ5K130 101 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 LRRC8AQ8IWT6 810 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 TNS4Q8IZW8 715 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 DPF3Q92784 378 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 BADQ92934 168 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 VWCEQ96DN2 955 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 CXCL16Q9H2A7 254 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 MTIF3Q9H2K0 278 aaKnown RBP15.42■□□□□ 0.06
SHOX2-206ENST00000554685 CYP3A43Q9HB55 503 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 RNF19AQ9NV58 838 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 PLAGL2Q9UPG8 496 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 NR2E3Q9Y5X4 410 aa15.42■□□□□ 0.06
SHOX2-206ENST00000554685 ARHGEF37A1IGU5 675 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 CARNS1A5YM72 827 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 F8VZ95 297 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 PODXLO00592 558 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 FGFR1P11362 822 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 SOX5P35711 763 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 WDR5P61964 334 aaKnown RBP15.41■□□□□ 0.06
SHOX2-206ENST00000554685 SOX4Q06945 474 aaPredicted RBP15.41■□□□□ 0.06
SHOX2-206ENST00000554685 NAB2Q15742 525 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 ASIC2Q16515 512 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 ARHGAP44Q17R89 818 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 WDR72Q3MJ13 1102 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 SPOPLQ6IQ16 392 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 GJB7Q6PEY0 223 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 CRIPAKQ8N1N5 446 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 SHC3Q92529 594 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 TATDN2Q93075 761 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 BAG1Q99933 345 aaPredicted RBP15.41■□□□□ 0.06
SHOX2-206ENST00000554685 DNAI2Q9GZS0 605 aa15.41■□□□□ 0.06
SHOX2-206ENST00000554685 APOBEC3GQ9HC16 384 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms