RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 MRPL12P52815 198 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 KCNJ2P63252 427 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TNNC1P63316 161 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 IFI35P80217 286 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 XRCC4Q13426 336 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 DRP2Q13474 957 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CCDC152Q4G0S7 254 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CCDC38Q502W7 563 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 WIPI1Q5MNZ9 446 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TMEM201Q5SNT2 666 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 GKAP1Q5VSY0 366 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 MSL1Q68DK7 614 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 AADACL2Q6P093 401 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 GJB7Q6PEY0 223 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 LRIG3Q6UXM1 1119 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 UNC13DQ70J99 1090 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 MAEAQ7L5Y9 396 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TEX11Q8IYF3 940 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 LRRC34Q8IZ02 419 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 SPICE1Q8N0Z3 855 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 UBR7Q8N806 425 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 MARCH10Q8NA82 808 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 NSMCE1Q8WV22 266 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 LARP4BQ92615 738 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TAF4BQ92750 862 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 GLG1Q92896 1179 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 GTPBP3Q969Y2 492 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CALML4Q96GE6 196 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 FAM84BQ96KN1 310 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 XPO6Q96QU8 1125 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 PRMT1Q99873 361 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ELAC2Q9BQ52 826 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 SELENOSQ9BQE4 189 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 UBE2OQ9C0C9 1292 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 UBA5Q9GZZ9 404 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 SMG9Q9H0W8 520 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 EPB41L4BQ9H329 900 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 BCAS3Q9H6U6 928 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CAAP1Q9H8G2 361 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ACTR5Q9H9F9 607 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TPSG1Q9NRR2 321 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ABCF3Q9NUQ8 709 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 PANK4Q9NVE7 773 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CEP72Q9P209 647 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 RNF14Q9UBS8 474 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 SAP30BPQ9UHR5 308 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 GGA2Q9UJY4 613 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 AJAP1Q9UKB5 411 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 SLC6A14Q9UN76 642 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF804BA4D1E1 1349 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 A0A1W2PQU0 124 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CCT8L1PA6NM43 557 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 KLRF2D3W0D1 207 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CLGNO14967 610 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 BUB1BO60566 1050 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ANP32DO95626 131 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 MMEP08473 750 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 PTPRAP18433 802 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 PEX19P40855 299 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 PRPHP41219 470 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 SLCO1A2P46721 670 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 USP11P51784 963 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 RING1Q06587 406 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 IFFO1Q0D2I5 559 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 COASYQ13057 564 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 AP3B2Q13367 1082 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 BIRC3Q13489 604 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 PRPF4BQ13523 1007 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CUL1Q13616 776 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 IKBKEQ14164 716 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 GRM4Q14833 912 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 NONOQ15233 471 aaKnown RBP eCLIP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 GRIK5Q16478 980 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ASIC2Q16515 512 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CALCRLQ16602 461 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 NFE2Q16621 373 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ZCWPW2Q504Y3 356 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 LACTB2Q53H82 288 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ERMARDQ5T6L9 678 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 DCAF12L1Q5VU92 463 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 LRCH2Q5VUJ6 765 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 KIAA1211LQ6NV74 962 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CYFIP1Q7L576 1253 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 IRF2BP2Q7Z5L9 587 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 STRA8Q7Z7C7 330 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 NEK8Q86SG6 692 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TXNRD3Q86VQ6 643 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 MYOCDQ8IZQ8 938 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 GUF1Q8N442 669 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 KIF2BQ8N4N8 673 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ARFGAP2Q8N6H7 521 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 LRRC57Q8N9N7 239 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 C1orf131Q8NDD1 294 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 AGAP11Q8TF27 550 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ATP8B4Q8TF62 1192 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CHAC2Q8WUX2 184 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 RAD54LQ92698 747 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 PMM1Q92871 262 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CUL5Q93034 780 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 COA7Q96BR5 231 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms