RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 C2orf40Q9H1Z8 148 aa15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 BLZF1Q9H2G9 400 aa15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 NPHP3-ACAD11A0A0J9YXS1 232 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 KLRC4O43908 158 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 PRKCBP05771 671 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 HOXA9P31269 272 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 OR1D2P34982 312 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 STARD6P59095 220 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 ELAVL2Q12926 359 aaKnown RBP15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 UBXN2BQ14CS0 331 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 NAB2Q15742 525 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 MAPK6Q16659 721 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 FAM187BQ17R55 369 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 PDXDC1Q6P996 788 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 GVINP1Q7Z2Y8 2422 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 DEPTORQ8TB45 409 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 SYAP1Q96A49 352 aaPredicted RBP15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 RMDN1Q96DB5 314 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 KXD1Q9BQD3 176 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 HCFC1R1Q9NWW0 138 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 GDAQ9Y2T3 454 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 PCDHA5Q9Y5H7 936 aa15.3■□□□□ 0.04
SPTLC2-202ENST00000554365 MYH11P35749 1972 aa15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 KANSL1LA0AUZ9 987 aa15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 ARHGEF35A5YM69 484 aa15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 MLF2Q15773 248 aaPredicted RBP15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 ZSCAN23Q3MJ62 389 aa15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 SLC44A4Q53GD3 710 aa15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 GLRA4Q5JXX5 417 aa15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 NT5DC1Q5TFE4 455 aa15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 EEF1DP3Q658K8 133 aa15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 PADI6Q6TGC4 694 aa15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 ING5Q8WYH8 240 aa15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 BSNDQ8WZ55 320 aa15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 RUBCNQ92622 972 aa15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 DDX12PQ92771 950 aa15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 BCO2Q9BYV7 579 aa15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 SPATA6Q9NWH7 488 aaPredicted RBP15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 KIAA1468Q9P260 1216 aa15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 DCHS1Q96JQ0 3298 aa15.29■□□□□ 0.04
SPTLC2-202ENST00000554365 COL4A3Q01955 1670 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 FRMD3A2A2Y4 597 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 ACKR2O00590 384 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 LAMTOR5O43504 91 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 B3GAT3O94766 335 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 EDN1P05305 212 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 MYL1P05976 194 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 CD72P21854 359 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 GUCY2CP25092 1073 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 NAMPTP43490 491 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 AMPD3Q01432 767 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 PRKCQQ04759 706 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 MAPK7Q13164 816 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 RAB33AQ14088 237 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 PABPC1LQ4VXU2 614 aaKnown RBP15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 DYMQ7RTS9 669 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 DAW1Q8N136 415 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 DCLK2Q8N568 766 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 CCDC113Q9H0I3 377 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 DNMT3BQ9UBC3 853 aaKnown RBP15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 MTF2Q9Y483 593 aaPredicted RBP15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 CDY1Q9Y6F8 540 aa15.28■□□□□ 0.04
SPTLC2-202ENST00000554365 FAM170BA6NMN3 283 aa15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 RPN1P04843 607 aaKnown RBP15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 FGFR3P22607 806 aa15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 IGFBP6P24592 240 aaPredicted RBP15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 PFKPQ01813 784 aa15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 EHHADHQ08426 723 aa15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 UVSSAQ2YD98 709 aa15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 DCAF4L1Q3SXM0 396 aa15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 DGLUCYQ7Z3D6 616 aa15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 NPAS3Q8IXF0 933 aa15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 MAML2Q8IZL2 1156 aaPredicted RBP15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 REEP2Q9BRK0 252 aa15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 FUCA2Q9BTY2 467 aa15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 KIFC3Q9BVG8 833 aa15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 LRRC27Q9C0I9 530 aa15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 POLD4Q9HCU8 107 aa15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 KCND2Q9NZV8 630 aa15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 MTRRQ9UBK8 725 aa15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 HOOK1Q9UJC3 728 aaKnown RBP15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 MAN1B1Q9UKM7 699 aa15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 MRPS23Q9Y3D9 190 aaKnown RBP15.27■□□□□ 0.04
SPTLC2-202ENST00000554365 SYCE3A1L190 88 aa15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 TMEM189-UBE2V1I3L0A0 370 aa15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 I3L4J1 428 aa15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 BMP6P22004 513 aa15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 TKTP29401 623 aaKnown RBP15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 CLCNKBP51801 687 aa15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 ASIC1P78348 528 aa15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 CSTF1Q05048 431 aaKnown RBP15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 RAD51AP2Q09MP3 1159 aa15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 PPP2R5AQ15172 486 aa15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 RSPO2Q6UXX9 243 aaPredicted RBP15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 UNC13DQ70J99 1090 aa15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 MCRS1Q96EZ8 462 aa15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 CCDC34Q96HJ3 373 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms