RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 SLC10A6Q3KNW5 377 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 TRIM60Q495X7 471 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 HS1BP3Q53T59 392 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 CD276Q5ZPR3 534 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 CATSPERGQ6ZRH7 1159 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 TEX11Q8IYF3 940 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 STPG3Q8N7X2 389 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 UHMK1Q8TAS1 419 aaKnown RBP3.87□□□□□ -1.79
SLIRP-202ENST00000553981 FERMT2Q96AC1 680 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 HOOK2Q96ED9 719 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 C12orf42Q96LP6 360 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 IER2Q9BTL4 223 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 KATNBL1Q9H079 304 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 CCSER2Q9H7U1 834 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 KIAA1522Q9P206 1035 aaPredicted RBP3.87□□□□□ -1.79
SLIRP-202ENST00000553981 ARHGAP20Q9P2F6 1191 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 PRKAG3Q9UGI9 489 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 ZBTB21Q9ULJ3 1066 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 ZFR2Q9UPR6 939 aaKnown RBP3.87□□□□□ -1.79
SLIRP-202ENST00000553981 TELO2Q9Y4R8 837 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 GBF1Q92538 1859 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 PLXNA1Q9UIW2 1896 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 PDS5AQ29RF7 1337 aaKnown RBP3.87□□□□□ -1.79
SLIRP-202ENST00000553981 TCF20Q9UGU0 1960 aaKnown RBP3.87□□□□□ -1.79
SLIRP-202ENST00000553981 UNC80Q8N2C7 3258 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 NPIPB8E9PQR5 432 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 DLX3O60479 287 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 IL18BPO95998 194 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 GH2P01242 217 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 ENO2P09104 434 aaPredicted RBP3.86□□□□□ -1.79
SLIRP-202ENST00000553981 HOXC6P09630 235 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 ZNF888P0CJ79 500 aaPredicted RBP3.86□□□□□ -1.79
SLIRP-202ENST00000553981 CYP2D6P10635 497 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 COL6A2P12110 1019 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 ZEB1P37275 1124 aaPredicted RBP3.86□□□□□ -1.79
SLIRP-202ENST00000553981 PFKPQ01813 784 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 GABPAQ06546 454 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 FOXE3Q13461 319 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 MTX1Q13505 466 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 LRRC41Q15345 812 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 FAM47AQ5JRC9 791 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 MIIPQ5JXC2 388 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 TMEM63BQ5T3F8 832 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 TATDN1Q6P1N9 297 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 RSPO2Q6UXX9 243 aaPredicted RBP3.86□□□□□ -1.79
SLIRP-202ENST00000553981 USP53Q70EK8 1073 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 EEPD1Q7L9B9 569 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 TAX1BP1Q86VP1 789 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 DZIP1Q86YF9 867 aaKnown RBP3.86□□□□□ -1.79
SLIRP-202ENST00000553981 REXO1L1PQ8IX06 675 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 MIGA1Q8NAN2 632 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 SPATA5Q8NB90 893 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 SLC44A5Q8NCS7 719 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 GIMAP8Q8ND71 665 aaPredicted RBP3.86□□□□□ -1.79
SLIRP-202ENST00000553981 GPRC5AQ8NFJ5 357 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 MAFAQ8NHW3 353 aaPredicted RBP3.86□□□□□ -1.79
SLIRP-202ENST00000553981 EDC3Q96F86 508 aaKnown RBP3.86□□□□□ -1.79
SLIRP-202ENST00000553981 ADOQ96SZ5 270 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 PHF20Q9BVI0 1012 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 MOV10L1Q9BXT6 1211 aaKnown RBP3.86□□□□□ -1.79
SLIRP-202ENST00000553981 CHMP4AQ9BY43 222 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 EPN3Q9H201 632 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 CAPN10Q9HC96 672 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 DDX20Q9UHI6 824 aaKnown RBP3.86□□□□□ -1.79
SLIRP-202ENST00000553981 DDX49Q9Y6V7 483 aaKnown RBP3.86□□□□□ -1.79
SLIRP-202ENST00000553981 PTPRCP08575 1304 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 ZNF236Q9UL36 1845 aa3.86□□□□□ -1.79
SLIRP-202ENST00000553981 EPOPA6NHQ4 379 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 ZNF839A8K0R7 811 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 H0Y858 1186 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 AGRPO00253 132 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 DNM1LO00429 736 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 NKRFO15226 690 aaKnown RBP eCLIP3.85□□□□□ -1.79
SLIRP-202ENST00000553981 CTAGE5O15320 804 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 BCAR3O75815 825 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 PGK1P00558 417 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 UBTFL1P0CB47 393 aaPredicted RBP3.85□□□□□ -1.79
SLIRP-202ENST00000553981 ZKSCAN1P17029 563 aaPredicted RBP3.85□□□□□ -1.79
SLIRP-202ENST00000553981 VCAM1P19320 739 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 GRK2P25098 689 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 GRK3P35626 688 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 RGS2P41220 211 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 ADCYAP1R1P41586 468 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 RARSP54136 660 aaKnown RBP3.85□□□□□ -1.79
SLIRP-202ENST00000553981 TLE2Q04725 743 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 FHL2Q14192 279 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 USP10Q14694 798 aaKnown RBP3.85□□□□□ -1.79
SLIRP-202ENST00000553981 SEPT2Q15019 361 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 IGFL4Q6B9Z1 124 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 CCSAPQ6IQ19 270 aaPredicted RBP3.85□□□□□ -1.79
SLIRP-202ENST00000553981 LBX2Q6XYB7 198 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 RNF207Q6ZRF8 634 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.85□□□□□ -1.79
SLIRP-202ENST00000553981 FUKQ8N0W3 1084 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 REPS2Q8NFH8 660 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 LPAR1Q92633 364 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 EAF2Q96CJ1 260 aaPredicted RBP3.85□□□□□ -1.79
SLIRP-202ENST00000553981 ZNF503Q96F45 646 aa3.85□□□□□ -1.79
SLIRP-202ENST00000553981 NEIL1Q96FI4 390 aaPredicted RBP3.85□□□□□ -1.79
SLIRP-202ENST00000553981 DYNLL2Q96FJ2 89 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms