RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 STMN4Q9H169 189 aaPredicted RBP7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 POLR3FQ9H1D9 316 aaPredicted RBP7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 ROPN1Q9HAT0 212 aaPredicted RBP7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 KCNK9Q9NPC2 374 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 EURLQ9NYK6 297 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 MCM8Q9UJA3 840 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 A8MUI8 341 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 GSTA1P08263 222 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 ZSCAN5DPP0CG00 497 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 KRT10P13645 584 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 BRAFP15056 766 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 ITIH2P19823 946 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 GCAP28676 217 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 SFNP31947 248 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 GTF2H1P32780 548 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 PIK3CAP42336 1068 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 NSFP46459 744 aaKnown RBP7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 PRKCEQ02156 737 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 MAP3K10Q02779 954 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 PTP4A2Q12974 167 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 FASTKD3Q14CZ7 662 aaKnown RBP7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 ZACNQ401N2 412 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 SEZ6Q53EL9 994 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 SWSAP1Q6NVH7 229 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 CRELD2Q6UXH1 353 aaPredicted RBP7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 CROCCP2Q86T23 111 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 GPATCH11Q8N954 259 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 CCDC63Q8NA47 563 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 ACSF2Q96CM8 615 aaPredicted RBP7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 ZBED3Q96IU2 234 aaPredicted RBP7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 ZBTB45Q96K62 511 aaPredicted RBP7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 TEPSINQ96N21 525 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 NTPCRQ9BSD7 190 aaKnown RBP7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 TRAIPQ9BWF2 469 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 FHDC1Q9C0D6 1143 aaPredicted RBP7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 NSRP1Q9H0G5 558 aaKnown RBP7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 RPAP3Q9H6T3 665 aaPredicted RBP7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 PDLIM7Q9NR12 457 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 HOMER3Q9NSC5 361 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 RNF146Q9NTX7 359 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 ARHGAP28Q9P2N2 729 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 ANAPC5Q9UJX4 755 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 TRIM33Q9UPN9 1127 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 USP15Q9Y4E8 981 aaPredicted RBP7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 PCDHA10Q9Y5I2 948 aa7.37□□□□□ -1.23
LINC-ROR-201ENST00000553704 GAS8O95995 478 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 C4BPAP04003 597 aaKnown RBP7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 ETS1P14921 441 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 KLRC2P26717 231 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 FOXN2P32314 431 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 PSMC4P43686 418 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 ZNF252P-AS1Q0IIN9 211 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 MAMLD1Q13495 774 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 TMED2Q15363 201 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 HP1BP3Q5SSJ5 553 aaPredicted RBP7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 WLSQ5T9L3 541 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 FKBP1CQ5VVH2 108 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 CYP4F22Q6NT55 531 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 MIS18BP1Q6P0N0 1132 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 KIF2BQ8N4N8 673 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 CKAP2Q8WWK9 683 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 SPOCK2Q92563 424 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 FAM212AQ96EL1 285 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 OSBPL8Q9BZF1 889 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 KIAA1683Q9H0B3 1180 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 KIF9Q9HAQ2 790 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 NOD2Q9HC29 1040 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 FZD1Q9UP38 647 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 PCDHB2Q9Y5E7 798 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 MGAMO43451 1857 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 LOC285556D6RIA3 1793 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 VWA5AO00534 786 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 CLTAP09496 248 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 TNNI1P19237 187 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 GARTP22102 1010 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 MAP2K2P36507 400 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 SSR1P43307 286 aaKnown RBP7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 ALDH5A1P51649 535 aaPredicted RBP7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 RPL7AP62424 266 aaKnown RBP7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 CUL2Q13617 745 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 PSMD6Q15008 389 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 P3H1Q32P28 736 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 GALNTL6Q49A17 601 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 MTERF2Q49AM1 385 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 ACCSLQ4AC99 568 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 TXNRD3NBQ6F5E7 133 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 TMEM270Q6UE05 265 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 NLRX1Q86UT6 975 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 SLC17A8Q8NDX2 589 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 OR5B17Q8NGF7 314 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 ATL2Q8NHH9 583 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 ASAP3Q8TDY4 903 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 LPAR1Q92633 364 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 PRCCQ92733 491 aaPredicted RBP7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 TMEM143Q96AN5 459 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 TBC1D31Q96DN5 1066 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 TGS1Q96RS0 853 aaKnown RBP7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 PLVAPQ9BX97 442 aa7.36□□□□□ -1.23
LINC-ROR-201ENST00000553704 ECT2Q9H8V3 914 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms