RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 LRRC47Q8N1G4 583 aaKnown RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 ZNF527Q8NB42 609 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 IGDCC4Q8TDY8 1250 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 ZFAND2BQ8WV99 257 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 EDARADDQ8WWZ3 215 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 TMEM87BQ96K49 555 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 SIKE1Q9BRV8 207 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 UNKQ9C0B0 810 aaKnown RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 RAD18Q9NS91 495 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 POLG2Q9UHN1 485 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 MYH8P13535 1937 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 A0A0G2JMZ2 1700 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 GAKO14976 1311 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 ZNF891A8MT65 544 aaPredicted RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 EFSO43281 561 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 AP5Z1O43299 807 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 PDCP20941 246 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 ZNF75DP51815 510 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 ANTXR2P58335 489 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 BPIFB4P59827 614 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 MRPS35P82673 323 aaKnown RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 CCINQ13939 588 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 PRKG1Q13976 671 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 GPR162Q16538 588 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 CAMK4Q16566 473 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 CLPPQ16740 277 aaPredicted RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 KCTD16Q68DU8 428 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 GDF6Q6KF10 455 aaPredicted RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 LYPD4Q6UWN0 246 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 NSMFQ6X4W1 530 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 BRAPQ7Z569 592 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 SYT9Q86SS6 491 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 CCDC13Q8IYE1 715 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 C7orf57Q8NEG2 295 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 ZNF384Q8TF68 577 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 CASP10Q92851 521 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 ACDQ96AP0 544 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 ERP27Q96DN0 273 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 CDHR1Q96JP9 859 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 MAELQ96JY0 434 aaKnown RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 CITED4Q96RK1 184 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 NDNQ99608 321 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 APBA2Q99767 749 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 EIF2AQ9BY44 585 aaKnown RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 PUS3Q9BZE2 481 aaKnown RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 ANKRD2Q9GZV1 360 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 RASAL2Q9UJF2 1139 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 FBXL5Q9UKA1 691 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 DSEQ9UL01 958 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 MAFFQ9ULX9 164 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 SATB2Q9UPW6 733 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 CCDC163A0A0D9SF12 145 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 TMEM232C9JQI7 657 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 N4BP3O15049 544 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 STAM2O75886 525 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 CLTBP09497 229 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 LINGO3P0C6S8 592 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 RARAP10276 462 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 EIF2AK2P19525 551 aaKnown RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 INHBCP55103 352 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 SPRED3Q2MJR0 410 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 ODF2Q5BJF6 829 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 ZNF468Q5VIY5 522 aaPredicted RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 PCNX4Q63HM2 1172 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 SLCO4C1Q6ZQN7 724 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 DAAM2Q86T65 1068 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 LRRC8AQ8IWT6 810 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 GRIN3AQ8TCU5 1115 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 IPCEF1Q8WWN9 437 aaPredicted RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 RADILQ96JH8 1075 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 NEK1Q96PY6 1258 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 FNBP1Q96RU3 617 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 NRDE2Q9H7Z3 1164 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 L2HGDHQ9H9P8 463 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 PIDD1Q9HB75 910 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 DCAF16Q9NXF7 216 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 OBP2AQ9NY56 170 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 NOP53Q9NZM5 478 aaKnown RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 TBK1Q9UHD2 729 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 XPO7Q9UIA9 1087 aaKnown RBP4.3□□□□□ -1.72
RDH11-204ENST00000553578 MOSPD1Q9UJG1 213 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 RCOR1Q9UKL0 485 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 STRIP2Q9ULQ0 834 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 PCDHB5Q9Y5E4 795 aa4.3□□□□□ -1.72
RDH11-204ENST00000553578 E7EWF7 191 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 RNF225M0QZC1 329 aaPredicted RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 PIK3R2O00459 728 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 CETN3O15182 167 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 OIP5O43482 229 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 H2AFYO75367 372 aaKnown RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 CPA1P15085 419 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 MTTPP55157 894 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 HLTFQ14527 1009 aaKnown RBP eCLIP4.29□□□□□ -1.72
RDH11-204ENST00000553578 SEC23AQ15436 765 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 ZNF385CQ66K41 422 aaPredicted RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 SLC15A3Q8IY34 581 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 TAGAPQ8N103 731 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 OR8H2Q8N162 312 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 SPATA5Q8NB90 893 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 MSANTD4Q8NCY6 345 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms