RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-222ENST00000553154 TSC2P49815 1807 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 I3L4J1 428 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 MAPK13O15264 365 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 ADAM12O43184 909 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 CXCL14O95715 111 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 NR3C1P04150 777 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 URODP06132 367 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 CD44P16070 742 aaKnown RBP10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 TKTP29401 623 aaKnown RBP10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 PRCPP42785 496 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 CASP4P49662 377 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 CLCN4P51793 760 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 PMS1P54277 932 aaKnown RBP10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 TFF2Q03403 129 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 EDRF1Q3B7T1 1238 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 USP41Q3LFD5 358 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 LEXMQ3ZCV2 418 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 LILRA6Q6PI73 481 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 SYCE2Q6PIF2 218 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 FOXR2Q6PJQ5 311 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 PRSS55Q6UWB4 352 aaPredicted RBP10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 LIMS2Q7Z4I7 341 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 OR5B17Q8NGF7 314 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 ATXN2LQ8WWM7 1075 aaKnown RBP10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 HLA-CQ95604 372 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 SMARCE1Q969G3 411 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 CCDC34Q96HJ3 373 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 CLSTN2Q9H4D0 955 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 TLE6Q9H808 572 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 INTS13Q9NVM9 706 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 MTRRQ9UBK8 725 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 MAPK8IP1Q9UQF2 711 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 BACE2Q9Y5Z0 518 aa10.96□□□□□ -0.65
CALCOCO1-222ENST00000553154 FSD2A1L4K1 749 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 ZNF233A6NK53 670 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 PPP1R3GB7ZBB8 358 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 SYN3O14994 580 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 XPOTO43592 962 aaKnown RBP10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 TADA2AO75478 443 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 AKAP3O75969 853 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 SMC2O95347 1197 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 BMP1P13497 986 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 CYP2J2P51589 502 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 LILRA4P59901 499 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 ENPEPQ07075 957 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 FAM171A1Q5VUB5 890 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 RBM43Q6ZSC3 357 aaKnown RBP10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 RBM23Q86U06 439 aaKnown RBP10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 WDR49Q8IV35 697 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 SMRP1Q8NCR6 262 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 BEST2Q8NFU1 509 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 FEZF2Q8TBJ5 459 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 GPT2Q8TD30 523 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 MICAL1Q8TDZ2 1067 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 ZNF516Q92618 1163 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 CCDC47Q96A33 483 aaKnown RBP10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 ASB2Q96Q27 587 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 MED15Q96RN5 788 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 CGRRF1Q99675 332 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 CLSTN3Q9BQT9 956 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 TTPALQ9BTX7 342 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 S1PR5Q9H228 398 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 MRPL17Q9NRX2 175 aaKnown RBP10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 DPP3Q9NY33 737 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 BARX2Q9UMQ3 279 aaPredicted RBP10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 PCDHB8Q9UN66 801 aa10.95□□□□□ -0.66
CALCOCO1-222ENST00000553154 TRIP11Q15643 1979 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 GRXCR2A6NFK2 248 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 OAZ2O95190 189 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 KIF20AO95235 890 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 CYP11A1P05108 521 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 EPCAMP16422 314 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 KCNA5P22460 613 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 PAX3P23760 479 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 KCNQ1P51787 676 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 TJAP1Q5JTD0 557 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 SLC8B1Q6J4K2 584 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 TTI2Q6NXR4 508 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 ANKRD54Q6NXT1 300 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 C15orf39Q6ZRI6 1047 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 LRRC52Q8N7C0 313 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 TRIML1Q8N9V2 468 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 TMC2Q8TDI7 906 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 PARD3BQ8TEW8 1205 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 RIN2Q8WYP3 895 aaPredicted RBP10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 SUSD6Q92537 303 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 PPP2R3CQ969Q6 453 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 FAM212AQ96EL1 285 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 GBP4Q96PP9 640 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 GTPBP4Q9BZE4 634 aaKnown RBP10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 MTMR12Q9C0I1 747 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 CLDND1Q9NY35 253 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 KIAA1468Q9P260 1216 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 HOOK1Q9UJC3 728 aaKnown RBP10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 ITGA11Q9UKX5 1188 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 SSX2IPQ9Y2D8 614 aa10.94□□□□□ -0.66
CALCOCO1-222ENST00000553154 MYO7AQ13402 2215 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms