RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 SP100P23497 879 aaPredicted RBP9.96□□□□□ -0.82
CDK4-211ENST00000552254 OR1G1P47890 313 aa9.96□□□□□ -0.82
CDK4-211ENST00000552254 ACOT2P49753 483 aa9.96□□□□□ -0.82
CDK4-211ENST00000552254 TUSC3Q13454 348 aa9.96□□□□□ -0.82
CDK4-211ENST00000552254 KCNC3Q14003 757 aa9.96□□□□□ -0.82
CDK4-211ENST00000552254 KCNB1Q14721 858 aa9.96□□□□□ -0.82
CDK4-211ENST00000552254 ENOX2Q16206 610 aaKnown RBP9.96□□□□□ -0.82
CDK4-211ENST00000552254 CRELD2Q6UXH1 353 aaPredicted RBP9.96□□□□□ -0.82
CDK4-211ENST00000552254 NELFCDQ8IXH7 590 aa9.96□□□□□ -0.82
CDK4-211ENST00000552254 ELOA2Q8IYF1 753 aaPredicted RBP9.96□□□□□ -0.82
CDK4-211ENST00000552254 ZSWIM2Q8NEG5 633 aa9.96□□□□□ -0.82
CDK4-211ENST00000552254 FEZF2Q8TBJ5 459 aa9.96□□□□□ -0.82
CDK4-211ENST00000552254 CCDC47Q96A33 483 aaKnown RBP9.96□□□□□ -0.82
CDK4-211ENST00000552254 TMEM169Q96HH4 297 aa9.96□□□□□ -0.82
CDK4-211ENST00000552254 PAAF1Q9BRP4 392 aa9.96□□□□□ -0.82
CDK4-211ENST00000552254 COLEC11Q9BWP8 271 aa9.96□□□□□ -0.82
CDK4-211ENST00000552254 VN1R3Q9BXE9 311 aa9.96□□□□□ -0.82
CDK4-211ENST00000552254 PCIF1Q9H4Z3 704 aa9.96□□□□□ -0.82
CDK4-211ENST00000552254 RPF1Q9H9Y2 349 aaKnown RBP9.96□□□□□ -0.82
CDK4-211ENST00000552254 PLEKHA5Q9HAU0 1116 aa9.96□□□□□ -0.82
CDK4-211ENST00000552254 MARCH5Q9NX47 278 aa9.96□□□□□ -0.82
CDK4-211ENST00000552254 CACNG4Q9UBN1 327 aa9.96□□□□□ -0.82
CDK4-211ENST00000552254 PRG3Q9Y2Y8 225 aaPredicted RBP9.96□□□□□ -0.82
CDK4-211ENST00000552254 CASTOR2A6NHX0 329 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 F8W810 466 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 CXCL14O95715 111 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 LDHAP00338 332 aaKnown RBP9.95□□□□□ -0.82
CDK4-211ENST00000552254 SRGAP2BP0DMP2 458 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 POU5F1Q01860 360 aaKnown RBP9.95□□□□□ -0.82
CDK4-211ENST00000552254 PPP2R3AQ06190 1150 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 SOX4Q06945 474 aaPredicted RBP9.95□□□□□ -0.82
CDK4-211ENST00000552254 SPAG1Q07617 926 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 HSP90AA2PQ14568 343 aaPredicted RBP9.95□□□□□ -0.82
CDK4-211ENST00000552254 SMC1AQ14683 1233 aaKnown RBP9.95□□□□□ -0.82
CDK4-211ENST00000552254 CBX2Q14781 532 aaPredicted RBP9.95□□□□□ -0.82
CDK4-211ENST00000552254 ZBTB6Q15916 424 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 ST3GAL2Q16842 350 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 KNOP1Q1ED39 458 aaKnown RBP9.95□□□□□ -0.82
CDK4-211ENST00000552254 PDE12Q6L8Q7 609 aaKnown RBP9.95□□□□□ -0.82
CDK4-211ENST00000552254 ANKRD54Q6NXT1 300 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 ARMCX5Q6P1M9 558 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 SYCE2Q6PIF2 218 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 DDX53Q86TM3 631 aaKnown RBP9.95□□□□□ -0.82
CDK4-211ENST00000552254 CD302Q8IX05 232 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 VPS52Q8N1B4 723 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 MRPL43Q8N983 215 aaKnown RBP9.95□□□□□ -0.82
CDK4-211ENST00000552254 SPATA20Q8TB22 786 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 RABGGTAQ92696 567 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 ERCC4Q92889 916 aaPredicted RBP9.95□□□□□ -0.82
CDK4-211ENST00000552254 C18orf25Q96B23 403 aaPredicted RBP9.95□□□□□ -0.82
CDK4-211ENST00000552254 SAAL1Q96ER3 474 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 CBWD1Q9BRT8 395 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 ZBP1Q9H171 429 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 NGRNQ9NPE2 291 aaKnown RBP9.95□□□□□ -0.82
CDK4-211ENST00000552254 SLC38A7Q9NVC3 462 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 HOOK1Q9UJC3 728 aaKnown RBP9.95□□□□□ -0.82
CDK4-211ENST00000552254 PCDHA5Q9Y5H7 936 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 HCFC2Q9Y5Z7 792 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 MTCL1Q9Y4B5 1905 aaKnown RBP9.95□□□□□ -0.82
CDK4-211ENST00000552254 SCN1AP35498 2009 aa9.95□□□□□ -0.82
CDK4-211ENST00000552254 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.94□□□□□ -0.82
CDK4-211ENST00000552254 GOLGA8IPA6NC78 632 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 C2orf71A6NGG8 1288 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 GOLGA8JA6NMD2 632 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 KIAA0391O15091 583 aaKnown RBP9.94□□□□□ -0.82
CDK4-211ENST00000552254 CLIC2O15247 247 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 EXTL3O43909 919 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 CLASP2O75122 1294 aaKnown RBP9.94□□□□□ -0.82
CDK4-211ENST00000552254 SMC2O95347 1197 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 EFEMP2O95967 443 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 WEE2P0C1S8 567 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 IGFBP6P24592 240 aaPredicted RBP9.94□□□□□ -0.82
CDK4-211ENST00000552254 SNRPFP62306 86 aaKnown RBP9.94□□□□□ -0.82
CDK4-211ENST00000552254 MTMR3Q13615 1198 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 HS2ST1Q7LGA3 356 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 GPD1LQ8N335 351 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 C12orf76Q8N812 135 aaPredicted RBP9.94□□□□□ -0.82
CDK4-211ENST00000552254 SMARCE1Q969G3 411 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 FAM212AQ96EL1 285 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 UROC1Q96N76 676 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 GBP4Q96PP9 640 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 GSDMAQ96QA5 445 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 TSPAN18Q96SJ8 248 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 CDCA3Q99618 268 aaPredicted RBP9.94□□□□□ -0.82
CDK4-211ENST00000552254 FAM213AQ9BRX8 229 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 S1PR5Q9H228 398 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 KCTD10Q9H3F6 313 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 GOLGA2P5Q9HBQ8 144 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 AGPAT3Q9NRZ7 376 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 LMBRD1Q9NUN5 540 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 HSPBP1Q9NZL4 362 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 CGNQ9P2M7 1197 aaKnown RBP9.94□□□□□ -0.82
CDK4-211ENST00000552254 ADAM28Q9UKQ2 775 aa9.94□□□□□ -0.82
CDK4-211ENST00000552254 HELZ2Q9BYK8 2649 aaKnown RBP9.93□□□□□ -0.82
CDK4-211ENST00000552254 USP9XQ93008 2570 aaPredicted RBP9.93□□□□□ -0.82
CDK4-211ENST00000552254 BPTFQ12830 3046 aa9.93□□□□□ -0.82
CDK4-211ENST00000552254 TMEM189-UBE2V1I3L0A0 370 aa9.93□□□□□ -0.82
CDK4-211ENST00000552254 PDXKO00764 312 aa9.93□□□□□ -0.82
CDK4-211ENST00000552254 TADA2AO75478 443 aa9.93□□□□□ -0.82
CDK4-211ENST00000552254 KIF4AO95239 1232 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms