RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 NOMO2Q5JPE7 1267 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 SFMBT2Q5VUG0 894 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 IQCEQ6IPM2 695 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 PHLDB3Q6NSJ2 640 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 PDXDC1Q6P996 788 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 RRAGAQ7L523 313 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 TMTC1Q8IUR5 882 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 PPM1KQ8N3J5 372 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 HELQQ8TDG4 1101 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 LINC01599Q8WXQ3 324 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 BAP1Q92560 729 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 HPDLQ96IR7 371 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 MRPL9Q9BYD2 267 aaKnown RBP11.18□□□□□ -0.62
NEK3-203ENST00000551355 NIF3L1Q9GZT8 377 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 XYLT2Q9H1B5 865 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 CYP3A43Q9HB55 503 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 AIPL1Q9NZN9 384 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 SIX4Q9UIU6 781 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 AGAP1Q9UPQ3 857 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 FHOD1Q9Y613 1164 aa11.18□□□□□ -0.62
NEK3-203ENST00000551355 ARHGEF37A1IGU5 675 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 F8VZ95 297 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 PIRO00625 290 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 EPHB6O15197 1021 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 CLSTN1O94985 981 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 CSF2RAP15509 400 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 FERP16591 822 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 FECHP22830 423 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 ANXA13P27216 316 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 POLR2BP30876 1174 aaKnown RBP11.17□□□□□ -0.62
NEK3-203ENST00000551355 SOX5P35711 763 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 JAM2P57087 298 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 BPIFB4P59827 614 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 TNNC1P63316 161 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 FPGSQ05932 587 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 TUSC3Q13454 348 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 CUL2Q13617 745 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 MEA1Q16626 185 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 SV2CQ496J9 727 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 GLRA4Q5JXX5 417 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 C9orf57Q5W0N0 161 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 PSRC1Q6PGN9 363 aaPredicted RBP11.17□□□□□ -0.62
NEK3-203ENST00000551355 CYP26C1Q6V0L0 522 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 GSTCDQ8NEC7 633 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 CXorf38Q8TB03 319 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 LPPQ93052 612 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 ZFP42Q96MM3 310 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 BAG1Q99933 345 aaPredicted RBP11.17□□□□□ -0.62
NEK3-203ENST00000551355 NLRC4Q9NPP4 1024 aa11.17□□□□□ -0.62
NEK3-203ENST00000551355 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.16□□□□□ -0.62
NEK3-203ENST00000551355 LRRC53A6NM62 1247 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 FGBP02675 491 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 SERPING1P05155 500 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 ITGB8P26012 769 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 KCNJ6P48051 423 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 TAF6P49848 677 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 SCNN1GP51170 649 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 LRMPQ12912 555 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 DRAP1Q14919 205 aaPredicted RBP11.16□□□□□ -0.62
NEK3-203ENST00000551355 ASIC2Q16515 512 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 WDR72Q3MJ13 1102 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 COL13A1Q5TAT6 717 aaPredicted RBP11.16□□□□□ -0.62
NEK3-203ENST00000551355 DPH6Q7L8W6 267 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 VPS36Q86VN1 386 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 CCDC170Q8IYT3 715 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 C7orf61Q8IZ16 206 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 CRIPAKQ8N1N5 446 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 SHC3Q92529 594 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 C18orf25Q96B23 403 aaPredicted RBP11.16□□□□□ -0.62
NEK3-203ENST00000551355 FAM193BQ96PV7 902 aaPredicted RBP11.16□□□□□ -0.62
NEK3-203ENST00000551355 LBHD1Q9BQE6 289 aaPredicted RBP11.16□□□□□ -0.62
NEK3-203ENST00000551355 PI4K2AQ9BTU6 479 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 MTIF3Q9H2K0 278 aaKnown RBP11.16□□□□□ -0.62
NEK3-203ENST00000551355 GDAP2Q9NXN4 497 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 TUBGCP4Q9UGJ1 667 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 NUB1Q9Y5A7 615 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 NR2E3Q9Y5X4 410 aa11.16□□□□□ -0.62
NEK3-203ENST00000551355 SSU72P8A0A1W2PR75 194 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 MEIS3P2A8K0S8 358 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 KPNA7A9QM74 516 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 ARHGAP6O43182 974 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 GFPT2O94808 682 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 SKILP12757 684 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 PRKCIP41743 596 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 RNASELQ05823 741 aaKnown RBP11.15□□□□□ -0.62
NEK3-203ENST00000551355 NAB2Q15742 525 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 ARHGAP44Q17R89 818 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 CLLU1OSQ5K130 101 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 DCLRE1AQ6PJP8 1040 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 ARHGEF19Q8IW93 802 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 FAM71AQ8IYT1 594 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 SPATA18Q8TC71 538 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 TATDN2Q93075 761 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 TOP1MTQ969P6 601 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 BCO2Q9BYV7 579 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 APOBEC3GQ9HC16 384 aaKnown RBP11.15□□□□□ -0.62
NEK3-203ENST00000551355 NXF1Q9UBU9 619 aaKnown RBP11.15□□□□□ -0.62
NEK3-203ENST00000551355 CNTN6Q9UQ52 1028 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 INPP5FQ9Y2H2 1132 aa11.15□□□□□ -0.62
NEK3-203ENST00000551355 BRCA2P51587 3418 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms