RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 LRPAP1P30533 357 aa17.76■□□□□ 0.43
VPS29-207ENST00000549970 ABCD1P33897 745 aa17.76■□□□□ 0.43
VPS29-207ENST00000549970 HTR4Q13639 388 aa17.76■□□□□ 0.43
VPS29-207ENST00000549970 MRPL58Q14197 206 aaKnown RBP17.76■□□□□ 0.43
VPS29-207ENST00000549970 SLC39A14Q15043 492 aa17.76■□□□□ 0.43
VPS29-207ENST00000549970 ZBTB6Q15916 424 aa17.76■□□□□ 0.43
VPS29-207ENST00000549970 PABPC1LQ4VXU2 614 aaKnown RBP17.76■□□□□ 0.43
VPS29-207ENST00000549970 CWF19L1Q69YN2 538 aaKnown RBP17.76■□□□□ 0.43
VPS29-207ENST00000549970 ZNF280DQ6N043 979 aa17.76■□□□□ 0.43
VPS29-207ENST00000549970 SV2BQ7L1I2 683 aa17.76■□□□□ 0.43
VPS29-207ENST00000549970 RTL10Q7L3V2 364 aa17.76■□□□□ 0.43
VPS29-207ENST00000549970 ITFG1Q8TB96 612 aa17.76■□□□□ 0.43
VPS29-207ENST00000549970 FGF13Q92913 245 aa17.76■□□□□ 0.43
VPS29-207ENST00000549970 PANK2Q9BZ23 570 aa17.76■□□□□ 0.43
VPS29-207ENST00000549970 CDH7Q9ULB5 785 aa17.76■□□□□ 0.43
VPS29-207ENST00000549970 PCDHB8Q9UN66 801 aa17.76■□□□□ 0.43
VPS29-207ENST00000549970 ZFP37Q9Y6Q3 630 aaPredicted RBP17.76■□□□□ 0.43
VPS29-207ENST00000549970 NOTCH4Q99466 2003 aa17.76■□□□□ 0.43
VPS29-207ENST00000549970 PIEZO1Q92508 2521 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 MYMKA6NI61 221 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 ANHXE9PGG2 379 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 ABLIM3O94929 683 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 LRG1P02750 347 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 SRFP11831 508 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 ATF2P15336 505 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 CYP3A5P20815 502 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 STAT6P42226 847 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 ACOT2P49753 483 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 MRE11P49959 708 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 ADALQ6DHV7 355 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 JADE1Q6IE81 842 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 CCDC73Q6ZRK6 1079 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 ZNF720Q7Z2F6 126 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 PHOX2BQ99453 314 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 ST6GALNAC4Q9H4F1 302 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 MRPL44Q9H9J2 332 aaKnown RBP17.75■□□□□ 0.43
VPS29-207ENST00000549970 CYP4F11Q9HBI6 524 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 TBC1D7Q9P0N9 293 aa17.75■□□□□ 0.43
VPS29-207ENST00000549970 CPSF3Q9UKF6 684 aaKnown RBP17.75■□□□□ 0.43
VPS29-207ENST00000549970 TIMM13Q9Y5L4 95 aaPredicted RBP17.75■□□□□ 0.43
VPS29-207ENST00000549970 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.75■□□□□ 0.43
VPS29-207ENST00000549970 A0A087X0B3 334 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 M0QZQ0 153 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 PPEF2O14830 753 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 SEC24AO95486 1093 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 NFICP08651 508 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 CPB1P15086 417 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 NPR3P17342 541 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 CLCN5P51795 746 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 YWHAHQ04917 246 aaPredicted RBP17.74■□□□□ 0.43
VPS29-207ENST00000549970 STK38Q15208 465 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 PARM1Q6UWI2 310 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 DSTYKQ6XUX3 929 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 BEST2Q8NFU1 509 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 ING5Q8WYH8 240 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 FGF14Q92915 247 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 DNAJC19Q96DA6 116 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 RPP25Q9BUL9 199 aaKnown RBP17.74■□□□□ 0.43
VPS29-207ENST00000549970 IKZF4Q9H2S9 585 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 FAM86C1Q9NVL1 165 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 AGO2Q9UKV8 859 aaKnown RBP17.74■□□□□ 0.43
VPS29-207ENST00000549970 CA14Q9ULX7 337 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 MRPS23Q9Y3D9 190 aaKnown RBP17.74■□□□□ 0.43
VPS29-207ENST00000549970 MORC2Q9Y6X9 1032 aaPredicted RBP17.74■□□□□ 0.43
VPS29-207ENST00000549970 MYH15Q9Y2K3 1946 aa17.74■□□□□ 0.43
VPS29-207ENST00000549970 ARHGEF37A1IGU5 675 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 H0Y858 1186 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 STK25O00506 426 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 GALR2O43603 387 aaPredicted RBP17.73■□□□□ 0.43
VPS29-207ENST00000549970 ADRB2P07550 413 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 RHOP08100 348 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 IDEP14735 1019 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 GAP43P17677 238 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 NASPP49321 788 aaPredicted RBP17.73■□□□□ 0.43
VPS29-207ENST00000549970 NUBP1P53384 320 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 ADCY1Q08828 1119 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 TMEM132DQ14C87 1099 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 FOXD4L5Q5VV16 416 aaPredicted RBP17.73■□□□□ 0.43
VPS29-207ENST00000549970 SPATA1Q5VX52 437 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 TPGS2Q68CL5 300 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 SLFN12LQ6IEE8 588 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 CD302Q8IX05 232 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 NPAS3Q8IXF0 933 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 TCEAL8Q8IYN2 117 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 PDILTQ8N807 584 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 GPR152Q8TDT2 470 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 FOXD4L4Q8WXT5 416 aaPredicted RBP17.73■□□□□ 0.43
VPS29-207ENST00000549970 POMGNT1Q8WZA1 660 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 SNX21Q969T3 373 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 HVCN1Q96D96 273 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 TSPAN18Q96SJ8 248 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 SEL1LQ9UBV2 794 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 WNT16Q9UBV4 365 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 KCNH3Q9ULD8 1083 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 INSL5Q9Y5Q6 135 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 ANK1P16157 1881 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 CACNA1HO95180 2353 aa17.73■□□□□ 0.43
VPS29-207ENST00000549970 KRBA1A5PL33 1030 aa17.72■□□□□ 0.43
VPS29-207ENST00000549970 PI15O43692 258 aa17.72■□□□□ 0.43
VPS29-207ENST00000549970 PPP1R37O75864 691 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms