RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 BRD3Q15059 726 aa18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 SKIV2LQ15477 1246 aaKnown RBP18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 TMCO3Q6UWJ1 677 aa18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 ASB2Q96Q27 587 aa18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 RUSC1Q9BVN2 902 aa18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 LMAN2LQ9H0V9 348 aa18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 ARHGAP20Q9P2F6 1191 aa18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 PCDHGC5Q9Y5F6 944 aa18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 PCDHA13Q9Y5I0 950 aa18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 ATP8B3O60423 1300 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 CTAGE15A4D2H0 777 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 LRRC53A6NM62 1247 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 INO80B-WBP1J3KQ70 363 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 GCNT3O95395 438 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 NR3C1P04150 777 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 CTAGE8P0CG41 777 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 ARF4P18085 180 aaPredicted RBP18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 PSMC2P35998 433 aaKnown RBP18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 RAB27AP51159 221 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 KCNQ1P51787 676 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 KIF11P52732 1056 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 MAPK7Q13164 816 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 ASTE1Q2TB18 679 aaPredicted RBP18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 TIGD5Q53EQ6 642 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 HS2ST1Q7LGA3 356 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 ZNF720Q7Z2F6 126 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 TRAPPC11Q7Z392 1133 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 CTAGE6Q86UF2 777 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 SLC9A9Q8IVB4 645 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 CTAGE4Q8IX94 777 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 LRRC43Q8N309 656 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 MYCT1Q8N699 235 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 SECISBP2LQ93073 1101 aaKnown RBP18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 CCDC113Q9H0I3 377 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 FAM53CQ9NYF3 392 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 SAR1BQ9Y6B6 198 aa18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 V9GYY5 206 aaPredicted RBP18.63■□□□□ 0.57
RBFOX1-207ENST00000547338 LRRIQ4A6NIV6 560 aa18.62■□□□□ 0.57
RBFOX1-207ENST00000547338 CSPG5O95196 566 aa18.62■□□□□ 0.57
RBFOX1-207ENST00000547338 MCM3P25205 808 aa18.62■□□□□ 0.57
RBFOX1-207ENST00000547338 EIF4A3P38919 411 aaKnown RBP18.62■□□□□ 0.57
RBFOX1-207ENST00000547338 PCBP1Q15365 356 aaKnown RBP eCLIP18.62■□□□□ 0.57
RBFOX1-207ENST00000547338 IQCEQ6IPM2 695 aa18.62■□□□□ 0.57
RBFOX1-207ENST00000547338 HNRNPLLQ8WVV9 542 aaKnown RBP18.62■□□□□ 0.57
RBFOX1-207ENST00000547338 KIFC3Q9BVG8 833 aa18.62■□□□□ 0.57
RBFOX1-207ENST00000547338 FGFBP2Q9BYJ0 223 aa18.62■□□□□ 0.57
RBFOX1-207ENST00000547338 RNF39Q9H2S5 420 aa18.62■□□□□ 0.57
RBFOX1-207ENST00000547338 FZD8Q9H461 694 aa18.62■□□□□ 0.57
RBFOX1-207ENST00000547338 NSUN3Q9H649 340 aaKnown RBP18.62■□□□□ 0.57
RBFOX1-207ENST00000547338 JRKLQ9Y4A0 524 aa18.62■□□□□ 0.57
RBFOX1-207ENST00000547338 FGF18O76093 207 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 NOL4O94818 638 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 ERLIN2O94905 339 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 LAG3P18627 525 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 HOXD13P35453 343 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 FAM193AP78312 1265 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 MRPS5P82675 430 aaKnown RBP18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 CACNB1Q02641 598 aaPredicted RBP18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 HYAL1Q12794 435 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 TJAP1Q5JTD0 557 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 ADGRD2Q7Z7M1 963 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 CDR2LQ86X02 465 aaPredicted RBP18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 MSANTD4Q8NCY6 345 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 POF1BQ8WVV4 589 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 HLA-CQ95604 372 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 ALS2CR12Q96Q35 445 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 LSM14BQ9BX40 385 aaKnown RBP18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 GBP3Q9H0R5 595 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 TMEM206Q9H813 350 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 TBC1D13Q9NVG8 400 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 LARSQ9P2J5 1176 aaKnown RBP18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 USP20Q9Y2K6 914 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 HES2Q9Y543 173 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 IPPQ9Y573 584 aa18.61■□□□□ 0.57
RBFOX1-207ENST00000547338 CCDC151A5D8V7 595 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 DLL1O00548 723 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 PRPF6O94906 941 aaKnown RBP18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 MYBP10242 640 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 SKIP12755 728 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 BMP1P13497 986 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 AXLP30530 894 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 MAGEA1P43355 309 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 RAD51AP2Q09MP3 1159 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 PPP2R5AQ15172 486 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 FAM187BQ17R55 369 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 NOTUMQ6P988 496 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 KCNT2Q6UVM3 1135 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 GBP6Q6ZN66 633 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 TMEM173Q86WV6 379 aaPredicted RBP18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 FAM178BQ8IXR5 827 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 ABI1Q8IZP0 508 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 ST6GALNAC4Q9H4F1 302 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 UBE2ZQ9H832 354 aaPredicted RBP18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 COG5Q9UP83 839 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 PCDHB12Q9Y5F1 795 aa18.6■□□□□ 0.57
RBFOX1-207ENST00000547338 A0A0U1RQJ8 604 aa18.59■□□□□ 0.57
RBFOX1-207ENST00000547338 A0A1B0GUA9 196 aa18.59■□□□□ 0.57
RBFOX1-207ENST00000547338 FSCN2O14926 492 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms