RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 ZNF623O75123 536 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 ERLIN1O75477 346 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 IL18RAPO95256 599 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 ASS1P00966 412 aaKnown RBP7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 CST3P01034 146 aaPredicted RBP7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 CXCL10P02778 98 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 PNMA6AP0CW24 399 aaPredicted RBP7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 KCNE1P15382 129 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 EN2P19622 333 aaPredicted RBP7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 POLR2FP61218 127 aaKnown RBP7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 KIF5AQ12840 1032 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 PAK2Q13177 524 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 PLEKHG4Q58EX7 1191 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 CCDC122Q5T0U0 273 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 HGSNATQ68CP4 663 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 FBXO38Q6PIJ6 1188 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 AGMOQ6ZNB7 445 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 KIAA1328Q86T90 577 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 UBR7Q8N806 425 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 USP38Q8NB14 1042 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 FBXL13Q8NEE6 735 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 NEK11Q8NG66 645 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 HNRNPLLQ8WVV9 542 aaKnown RBP7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 ZFP42Q96MM3 310 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 ARID3AQ99856 593 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 SYT11Q9BT88 431 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 ASB7Q9H672 318 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 C11orf49Q9H6J7 331 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 NHEJ1Q9H9Q4 299 aaPredicted RBP7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 RPF1Q9H9Y2 349 aaKnown RBP7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 CHST12Q9NRB3 414 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 FAM105AQ9NUU6 356 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 FAM53CQ9NYF3 392 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 APEX2Q9UBZ4 518 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 C2CD2Q9Y426 696 aa7.54□□□□□ -1.2
HMGCS2-204ENST00000544913 LTBP2Q14767 1821 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 TTC3P53804 2025 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 A0A0U1RQF3 1178 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 CTAGE15A4D2H0 777 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 TRIM43BA6NCK2 446 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 LRRC53A6NM62 1247 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 F8VZ95 297 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 PPEF2O14830 753 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 GPR182O15218 404 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 INPPL1O15357 1258 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 B4GALT3O60512 393 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 N4BP1O75113 896 aaKnown RBP7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 LCA5LO95447 670 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 CTAGE8P0CG41 777 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 PRLRP16471 622 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 ACO1P21399 889 aaKnown RBP7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 IGFBP6P24592 240 aaPredicted RBP7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 CYP2C18P33260 490 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 ARHGAP25P42331 645 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 FAM189BP81408 668 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 GABPB1Q06547 395 aaPredicted RBP7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 CKAP4Q07065 602 aaKnown RBP7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 NFX1Q12986 1120 aaKnown RBP7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 NAA30Q147X3 362 aaPredicted RBP7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 KYAT1Q16773 422 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 TMEM132AQ24JP5 1023 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 TWF2Q6IBS0 349 aaKnown RBP7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 SPOPLQ6IQ16 392 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 TRAPPC11Q7Z392 1133 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 CTAGE6Q86UF2 777 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 GPIHBP1Q8IV16 184 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 FMNL3Q8IVF7 1028 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 CTAGE4Q8IX94 777 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 LPPQ93052 612 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 TATDN2Q93075 761 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 C18orf25Q96B23 403 aaPredicted RBP7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 TRIM43Q96BQ3 446 aaPredicted RBP7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 SCLYQ96I15 445 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 ACAP3Q96P50 834 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 PPP1R10Q96QC0 940 aaKnown RBP7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 CHP1Q99653 195 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 ADPGKQ9BRR6 497 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 IFIH1Q9BYX4 1025 aaKnown RBP7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 TSPYL2Q9H2G4 693 aaPredicted RBP7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 PLEKHA5Q9HAU0 1116 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 ARFGAP3Q9NP61 516 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 NLRC4Q9NPP4 1024 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 RAB20Q9NX57 234 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 MIOSQ9NXC5 875 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 TUBGCP4Q9UGJ1 667 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 MYO6Q9UM54 1294 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 DAAM1Q9Y4D1 1078 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 NUB1Q9Y5A7 615 aa7.53□□□□□ -1.2
HMGCS2-204ENST00000544913 SMIM28A0A1B0GU29 152 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 PLEKP08567 350 aaPredicted RBP7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 TNNI1P19237 187 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 VAV2P52735 878 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 MYL6P60660 151 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 BFSP2Q13515 415 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 NCOA4Q13772 614 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 ASTE1Q2TB18 679 aaPredicted RBP7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 GLRA4Q5JXX5 417 aa7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 PAPD7Q5XG87 772 aaKnown RBP7.52□□□□□ -1.2
HMGCS2-204ENST00000544913 CACNA2D4Q7Z3S7 1137 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms