RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 CFAP97Q9P2B7 532 aa3□□□□□ -1.93
YBX3-214ENST00000544501 GABBR1Q9UBS5 961 aa3□□□□□ -1.93
YBX3-214ENST00000544501 ABCF2Q9UG63 623 aa3□□□□□ -1.93
YBX3-214ENST00000544501 FEZ2Q9UHY8 353 aaPredicted RBP3□□□□□ -1.93
YBX3-214ENST00000544501 FZD1Q9UP38 647 aa3□□□□□ -1.93
YBX3-214ENST00000544501 USP15Q9Y4E8 981 aaPredicted RBP3□□□□□ -1.93
YBX3-214ENST00000544501 NR2E3Q9Y5X4 410 aa3□□□□□ -1.93
YBX3-214ENST00000544501 FPGT-TNNI3KV9GXZ4 949 aa3□□□□□ -1.93
YBX3-214ENST00000544501 A0A1B0GTW7 788 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 MARCH11A6NNE9 402 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 H3BUI4 141 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 ZNF185O15231 689 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 B3GALT2O43825 422 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 RPS6KA4O75676 772 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 UBXN7O94888 489 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 CHEK2O96017 543 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 HRGP04196 525 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 CFIP05156 583 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 ITGB1P05556 798 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 C1SP09871 688 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 INSRRP14616 1297 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 LAG3P18627 525 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 TNFRSF1AP19438 455 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 SLC6A2P23975 617 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 PTGS2P35354 604 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 BMPR1AP36894 532 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 AGFG1P52594 562 aaKnown RBP2.99□□□□□ -1.93
YBX3-214ENST00000544501 MXRA7P84157 204 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 TUBA3CQ13748 450 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 FGL2Q14314 439 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 HLTFQ14527 1009 aaKnown RBP eCLIP2.99□□□□□ -1.93
YBX3-214ENST00000544501 PLS1Q14651 629 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 KIF22Q14807 665 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 BEAN1Q3B7T3 259 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 ANO6Q4KMQ2 910 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 ARHGAP29Q52LW3 1261 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 PDCD4Q53EL6 469 aaKnown RBP2.99□□□□□ -1.93
YBX3-214ENST00000544501 UTP14CQ5TAP6 766 aaKnown RBP2.99□□□□□ -1.93
YBX3-214ENST00000544501 TSHZ3Q63HK5 1081 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 TUBA3EQ6PEY2 450 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 CHST15Q7LFX5 561 aaPredicted RBP2.99□□□□□ -1.93
YBX3-214ENST00000544501 OVCH2Q7RTZ1 564 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 DAAM2Q86T65 1068 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 WDR75Q8IWA0 830 aaKnown RBP2.99□□□□□ -1.93
YBX3-214ENST00000544501 ZBTB34Q8NCN2 500 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 TBC1D15Q8TC07 691 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 HAS1Q92839 578 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 DDX17Q92841 729 aaKnown RBP2.99□□□□□ -1.93
YBX3-214ENST00000544501 SCAMP4Q969E2 229 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 LENG9Q96B70 501 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 MYEOVQ96EZ4 313 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 SLC35A4Q96G79 324 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 PHACTR3Q96KR7 559 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 LRFN3Q9BTN0 628 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 ZNF747Q9BV97 191 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 SIK2Q9H0K1 926 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 MRPL46Q9H2W6 279 aaKnown RBP2.99□□□□□ -1.93
YBX3-214ENST00000544501 FAM204AQ9H8W3 233 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 GPR35Q9HC97 309 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 AKIP1Q9NQ31 210 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 TRPM5Q9NZQ8 1165 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 KCNE5Q9UJ90 142 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 NEU2Q9Y3R4 380 aa2.99□□□□□ -1.93
YBX3-214ENST00000544501 MYADML2A6NDP7 307 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 PRSS29PA6NIE9 313 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 TMEM200CA6NKL6 621 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 VSTM5A8MXK1 200 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 KIF3BO15066 747 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 MATN3O15232 486 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 FAM20BO75063 409 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 AGFG2O95081 481 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 PRSS23O95084 383 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 MATN4O95460 622 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 GJB1P08034 283 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 RARBP10826 455 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 ATF3P18847 181 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 PTTG1IPP53801 180 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 RAB1AP62820 205 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 NOMO3P69849 1222 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 POU6F2P78424 691 aaPredicted RBP2.98□□□□□ -1.93
YBX3-214ENST00000544501 FAM189BP81408 668 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 OCA2Q04671 838 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 SLFN5Q08AF3 891 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 TCF15Q12870 199 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 LSM12Q3MHD2 195 aaKnown RBP2.98□□□□□ -1.93
YBX3-214ENST00000544501 SPDYE7PQ495Y7 208 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 HSP90AB2PQ58FF8 381 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 NOMO2Q5JPE7 1267 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 FOXR2Q6PJQ5 311 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 CRIP3Q6Q6R5 217 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 LRRC55Q6ZSA7 311 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 RHOUQ7L0Q8 258 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 C14orf80Q86SX3 495 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 PPP1R3BQ86XI6 285 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 DGKHQ86XP1 1220 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 MAPKAPK5Q8IW41 473 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 KIAA0319LQ8IZA0 1049 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 SYNE4Q8N205 404 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 TMEM132CQ8N3T6 1108 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 PLBD2Q8NHP8 589 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms