RNA–Protein interactions for RNA: ENST00000544257.5

RIMKLB-212, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 1 (best)

Gene RIMKLB, Length 1,589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-212ENST00000544257 IKZF4Q9H2S9 585 aa10.52□□□□□ -0.73
RIMKLB-212ENST00000544257 KIAA1586Q9HCI6 787 aa10.52□□□□□ -0.73
RIMKLB-212ENST00000544257 AGPAT3Q9NRZ7 376 aa10.52□□□□□ -0.73
RIMKLB-212ENST00000544257 ADAM28Q9UKQ2 775 aa10.52□□□□□ -0.73
RIMKLB-212ENST00000544257 PRG3Q9Y2Y8 225 aaPredicted RBP10.52□□□□□ -0.73
RIMKLB-212ENST00000544257 C2CD2Q9Y426 696 aa10.52□□□□□ -0.73
RIMKLB-212ENST00000544257 TRIP11Q15643 1979 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 LACTBL1A8MY62 500 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 PRPF40AO75400 957 aaKnown RBP10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 SOD2P04179 222 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 RPIAP49247 311 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 ACOT2P49753 483 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 ERVFC1P60507 584 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 ELAVL2Q12926 359 aaKnown RBP10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 PNOCQ13519 176 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 MYBPC2Q14324 1141 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 SMC1AQ14683 1233 aaKnown RBP10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 UPP1Q16831 310 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 COBLL1Q53SF7 1204 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 DCLRE1AQ6PJP8 1040 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 BRSK2Q8IWQ3 736 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 VPS52Q8N1B4 723 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 GPD1LQ8N335 351 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 GUF1Q8N442 669 aaKnown RBP10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 CDCA3Q99618 268 aaPredicted RBP10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 TCF25Q9BQ70 676 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 VN1R3Q9BXE9 311 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 KCTD10Q9H3F6 313 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 ENTPD7Q9NQZ7 604 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 UBQLN1Q9UMX0 589 aaKnown RBP10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 SSX2IPQ9Y2D8 614 aa10.51□□□□□ -0.73
RIMKLB-212ENST00000544257 SF3B1O75533 1304 aaKnown RBP eCLIP10.5□□□□□ -0.733e-6■■■■■ 81.8
RIMKLB-212ENST00000544257 CASTOR2A6NHX0 329 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 PDXKO00764 312 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 TRIM66O15016 1216 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 KIF4AO95239 1232 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 PAX3P23760 479 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 LRPAP1P30533 357 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 IRS1P35568 1242 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 PRR20EP86478 221 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 PRR20CP86479 221 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 PRR20DP86480 221 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 PRR20BP86481 221 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 PRR20AP86496 221 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 SOX4Q06945 474 aaPredicted RBP10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 NFIL3Q16649 462 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 TCEAL5Q5H9L2 206 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 FUT10Q6P4F1 479 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 TMC7Q7Z402 723 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 SLC9A9Q8IVB4 645 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 NELFCDQ8IXH7 590 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 MICALL1Q8N3F8 863 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 MRPL43Q8N983 215 aaKnown RBP10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 SMARCE1Q969G3 411 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 PAAF1Q9BRP4 392 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 FAM213AQ9BRX8 229 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 HSPBP1Q9NZL4 362 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 COG5Q9UP83 839 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 TRAF3IP3Q9Y228 551 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 PCDHA5Q9Y5H7 936 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 ANK1P16157 1881 aa10.5□□□□□ -0.73
RIMKLB-212ENST00000544257 C2orf71A6NGG8 1288 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 ZNF233A6NK53 670 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 TNFRSF10AO00220 468 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 PODXLO00592 558 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 LCE2BO14633 110 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 TRAPPC3O43617 180 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 TADA2AO75478 443 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 MMP16P51512 607 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 CLCNKBP51801 687 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 TMEM132DQ14C87 1099 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 SURF1Q15526 300 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 CCDC85BQ15834 202 aaPredicted RBP10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 ZNF658Q5TYW1 1059 aaPredicted RBP10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 SPATA1Q5VX52 437 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 XXYLT1Q8NBI6 393 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 MICAL1Q8TDZ2 1067 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 SAAL1Q96ER3 474 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 CHST7Q9NS84 486 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 DMAC2Q9NW81 257 aa10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 RBAKQ9NYW8 714 aaPredicted RBP10.49□□□□□ -0.73
RIMKLB-212ENST00000544257 F8W810 466 aa10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 GOLGA6L22H0YM25 854 aa10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 ZBTB24O43167 697 aaPredicted RBP10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 CALUO43852 315 aaPredicted RBP10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 GDF9O60383 454 aa10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 LILRB3O75022 631 aa10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 B3GAT3O94766 335 aa10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 C1RP00736 705 aa10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 URODP06132 367 aa10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 PPP1R2P41236 205 aa10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 GLUD2P49448 558 aa10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 DSG1Q02413 1049 aa10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 CREMQ03060 361 aa10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 HYAL1Q12794 435 aa10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 PTPN14Q15678 1187 aa10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 DUSP6Q16828 381 aa10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 CTC1Q2NKJ3 1217 aa10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 USP41Q3LFD5 358 aa10.48□□□□□ -0.73
RIMKLB-212ENST00000544257 KIAA0319Q5VV43 1072 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms