RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 FAM124BQ9H5Z6 455 aaPredicted RBP6.33□□□□□ -1.4
ABCF1-207ENST00000542772 GOLGA2P5Q9HBQ8 144 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 DNAJB4Q9UDY4 337 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 FAN1Q9Y2M0 1017 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 SCN1AP35498 2009 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 LCHNA4D1U4 455 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 LGALS16A8MUM7 142 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 KPNA7A9QM74 516 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 M0QZQ0 153 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 PODXLO00592 558 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 PPEF2O14830 753 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 SPTLC1O15269 473 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 HLA-DRAP01903 254 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 ITGB3P05106 788 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 CYP11A1P05108 521 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 LAG3P18627 525 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 SLC9A1P19634 815 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 PON1P27169 355 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 BMPR1AP36894 532 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 SLC11A1P49279 550 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 ALDH7A1P49419 539 aaKnown RBP6.32□□□□□ -1.4
ABCF1-207ENST00000542772 UBASH3AP57075 661 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 MYL6P60660 151 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 RNASELQ05823 741 aaKnown RBP6.32□□□□□ -1.4
ABCF1-207ENST00000542772 CETN1Q12798 172 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 NCOA4Q13772 614 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 MRPL58Q14197 206 aaKnown RBP6.32□□□□□ -1.4
ABCF1-207ENST00000542772 FILIP1LQ4L180 1135 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 DCAF17Q5H9S7 520 aaPredicted RBP6.32□□□□□ -1.4
ABCF1-207ENST00000542772 TCERG1LQ5VWI1 586 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 LMBRD2Q68DH5 695 aaPredicted RBP6.32□□□□□ -1.4
ABCF1-207ENST00000542772 FAM109BQ6ICB4 259 aaPredicted RBP6.32□□□□□ -1.4
ABCF1-207ENST00000542772 PHLDB3Q6NSJ2 640 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 FAM117BQ6P1L5 589 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 CREBRFQ8IUR6 639 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 SLC39A11Q8N1S5 342 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 C3orf58Q8NDZ4 430 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 SPATA18Q8TC71 538 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 TAS1R2Q8TE23 839 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 JAKMIP2Q96AA8 810 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 FAM193BQ96PV7 902 aaPredicted RBP6.32□□□□□ -1.4
ABCF1-207ENST00000542772 YME1L1Q96TA2 773 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 PLVAPQ9BX97 442 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 PBX4Q9BYU1 374 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 EDEM3Q9BZQ6 932 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 MTMR12Q9C0I1 747 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 SIX2Q9NPC8 291 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 PLCB1Q9NQ66 1216 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 AAASQ9NRG9 546 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 CHST7Q9NS84 486 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 MARCH5Q9NX47 278 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 TAB2Q9NYJ8 693 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 STK39Q9UEW8 545 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 TUBGCP4Q9UGJ1 667 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 FBXL5Q9UKA1 691 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 AGAP1Q9UPQ3 857 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 INPP5FQ9Y2H2 1132 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 SIK3Q9Y2K2 1263 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 RWDD3Q9Y3V2 267 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 DAAM1Q9Y4D1 1078 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 MRPL42Q9Y6G3 142 aaKnown RBP6.32□□□□□ -1.4
ABCF1-207ENST00000542772 RANBP2P49792 3224 aaKnown RBP6.32□□□□□ -1.4
ABCF1-207ENST00000542772 GBF1Q92538 1859 aa6.32□□□□□ -1.4
ABCF1-207ENST00000542772 LINC01553A4QN01 128 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 CASTOR2A6NHX0 329 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 GABRDO14764 452 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 TBC1D4O60343 1298 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 LILRB3O75022 631 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 PHACTR2O75167 634 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 TACC1O75410 805 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 TADA2AO75478 443 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 B3GAT3O94766 335 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 NOL4O94818 638 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 SERPINC1P01008 464 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 TPM2P07951 284 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 MYOGP15173 224 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 FGFR3P22607 806 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 POLR2BP30876 1174 aaKnown RBP6.31□□□□□ -1.4
ABCF1-207ENST00000542772 PBX2P40425 430 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 OR1G1P47890 313 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 TAF6P49848 677 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 MXI1P50539 228 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 GUCY2FP51841 1108 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 RABGGTBP53611 331 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 TAP1Q03518 808 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 UBXN1Q04323 297 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 MYO1EQ12965 1108 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 BIRC3Q13489 604 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 TRPC3Q13507 836 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 GSE1Q14687 1217 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 RAB30Q15771 203 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 EXOC3L4Q17RC7 722 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 SV2CQ496J9 727 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 PAN2Q504Q3 1202 aaKnown RBP6.31□□□□□ -1.4
ABCF1-207ENST00000542772 TIGD5Q53EQ6 642 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 FIGNQ5HY92 759 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 CHRDL2Q6WN34 429 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 GBP6Q6ZN66 633 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 DDX53Q86TM3 631 aaKnown RBP6.31□□□□□ -1.4
ABCF1-207ENST00000542772 TMEM130Q8N3G9 435 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms