RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 LEMD3Q9Y2U8 911 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 AFF2P51816 1311 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 SYNGAP1Q96PV0 1343 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 NPHP4O75161 1426 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ZFYVE9O95405 1425 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 KNDC1Q76NI1 1749 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 A0A0B4J203 849 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 LOC105371267A0A1B0GV96 52 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 VPS37CA5D8V6 355 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 AP3B1O00203 1094 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 GFRA2O00451 464 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 FBP2O00757 339 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 APAF1O14727 1248 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 SPTLC2O15270 562 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 ALOX15BO15296 676 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 ORC4O43929 436 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 ZNF862O60290 1169 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 NMT2O60551 498 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 KCNJ13O60928 360 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 DAB1O75553 588 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 TSPAN9O75954 239 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 CYP1A2P05177 515 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 ALAS1P13196 640 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 PRLRP16471 622 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 BTF3P20290 206 aaKnown RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 TBXAS1P24557 533 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 PPARGP37231 505 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 ETFBP38117 255 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 VHLP40337 213 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 MSH2P43246 934 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 GIPRP48546 466 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 RASSF2P50749 326 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 NLRP12P59046 1061 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 RAC1P63000 192 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 AP2B1P63010 937 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 NOP14P78316 857 aaKnown RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 IGBP1P78318 339 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 KRT83P78385 493 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 XIAPP98170 497 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 RELAQ04206 551 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 TBX2Q13207 712 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 PDCLQ13371 301 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 SQLEQ14534 574 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 ACAP1Q15027 740 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 IMMTQ16891 758 aaKnown RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 BBS9Q3SYG4 887 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 HERC4Q5GLZ8 1057 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 FAM209AQ5JX71 171 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 C10orf76Q5T2E6 689 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 TMTC4Q5T4D3 741 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 TCERG1LQ5VWI1 586 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 SNX30Q5VWJ9 437 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 TRIM68Q6AZZ1 485 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 OTUD7BQ6GQQ9 843 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 SNRNP48Q6IEG0 339 aaKnown RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 PPP4R4Q6NUP7 873 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 BORAQ6PGQ7 559 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 FIP1L1Q6UN15 594 aaKnown RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 MPRIPQ6WCQ1 1025 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 SLC30A10Q6XR72 485 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 B3GNT6Q6ZMB0 384 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 PPP1R21Q6ZMI0 780 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 CCDC129Q6ZRS4 1044 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 GK5Q6ZS86 529 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 INTS8Q75QN2 995 aaKnown RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 ANO5Q75V66 913 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 MARK2Q7KZI7 788 aaKnown RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 RASGRP2Q7LDG7 609 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 CPLX4Q7Z7G2 160 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 FBXO11Q86XK2 927 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 SCYL3Q8IZE3 742 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 TCP11L2Q8N4U5 519 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 ALLCQ8N6M5 410 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 TMCO5AQ8N6Q1 288 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 ZNF713Q8N859 430 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 TERB1Q8NA31 727 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 NOA1Q8NC60 698 aaKnown RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 GALNT11Q8NCW6 608 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 NEDD1Q8NHV4 660 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 CALML6Q8TD86 181 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 ELMO3Q96BJ8 720 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 ANAPC16Q96DE5 110 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 ASIC4Q96FT7 647 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 GPATCH3Q96I76 525 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 SHDQ96IW2 340 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 COX4I2Q96KJ9 171 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 CFAP57Q96MR6 1250 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 NEUROD6Q96NK8 337 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 MTMR9Q96QG7 549 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 USP28Q96RU2 1077 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 CDRT15Q96T59 188 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 SEC62Q99442 399 aaKnown RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 OLFM1Q99784 485 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 IFIH1Q9BYX4 1025 aaKnown RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 API5Q9BZZ5 524 aaKnown RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 SMARCAD1Q9H4L7 1026 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 CCDC134Q9H6E4 229 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 PIDD1Q9HB75 910 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 RRAGCQ9HB90 399 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms