RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 GPS1Q13098 491 aa15.97■□□□□ 0.15
VARS2-211ENST00000541562 FLAD1Q8NFF5 587 aa15.97■□□□□ 0.15
VARS2-211ENST00000541562 HSPH1Q92598 858 aa15.97■□□□□ 0.15
VARS2-211ENST00000541562 GGA3Q9NZ52 723 aa15.97■□□□□ 0.15
VARS2-211ENST00000541562 ATRNL1Q5VV63 1379 aa15.97■□□□□ 0.15
VARS2-211ENST00000541562 PPFIA2O75334 1257 aa15.97■□□□□ 0.15
VARS2-211ENST00000541562 KCNA3P22001 575 aa15.97■□□□□ 0.15
VARS2-211ENST00000541562 EFTUD2Q15029 972 aaKnown RBP eCLIP15.97■□□□□ 0.156e-9■■■■■ 35
VARS2-211ENST00000541562 RNF149Q8NC42 400 aa15.97■□□□□ 0.15
VARS2-211ENST00000541562 KCNV2Q8TDN2 545 aa15.97■□□□□ 0.15
VARS2-211ENST00000541562 SLCO1B3Q9NPD5 702 aa15.97■□□□□ 0.15
VARS2-211ENST00000541562 PIH1D1Q9NWS0 290 aaKnown RBP15.97■□□□□ 0.15
VARS2-211ENST00000541562 SAMD15Q9P1V8 674 aa15.97■□□□□ 0.15
VARS2-211ENST00000541562 BYSLQ13895 437 aaKnown RBP15.97■□□□□ 0.15
VARS2-211ENST00000541562 TREML2Q5T2D2 321 aa15.97■□□□□ 0.15
VARS2-211ENST00000541562 B3GNT9Q6UX72 402 aa15.97■□□□□ 0.15
VARS2-211ENST00000541562 MFSD7Q6UXD7 560 aa15.97■□□□□ 0.15
VARS2-211ENST00000541562 ZC3H18Q86VM9 953 aaKnown RBP15.97■□□□□ 0.15
VARS2-211ENST00000541562 RTKN2Q8IZC4 609 aa15.97■□□□□ 0.15
VARS2-211ENST00000541562 SIPA1L1O43166 1804 aa15.97■□□□□ 0.15
VARS2-211ENST00000541562 BTNL10A8MVZ5 291 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 MAPTP10636 758 aaKnown RBP15.96■□□□□ 0.15
VARS2-211ENST00000541562 NEFHP12036 1026 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 DRD4P21917 467 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 STX2P32856 288 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 CLEC16AQ2KHT3 1053 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 MCTP2Q6DN12 878 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 ATP6V0A4Q9HBG4 840 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 AGTPBP1Q9UPW5 1226 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 ATP4AP20648 1035 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 NUMBP49757 651 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 DNAJC3Q13217 504 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 ZNF449Q6P9G9 518 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 VSIG10LQ86VR7 867 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 C4orf19Q8IY42 314 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 CCDC197Q8NCU1 140 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 PRPF31Q8WWY3 499 aaKnown RBP15.96■□□□□ 0.15
VARS2-211ENST00000541562 SLC7A3Q8WY07 619 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 ATP6V0A1Q93050 837 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 ADAM7Q9H2U9 754 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 ZNF408Q9H9D4 720 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 AAASQ9NRG9 546 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 PCDHA3Q9Y5H8 950 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 DOCK5Q9H7D0 1870 aa15.96■□□□□ 0.15
VARS2-211ENST00000541562 VNN1O95497 513 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 PSAPP07602 524 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 SCTRP47872 440 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 CLCN3P51790 818 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 OVGP1Q12889 678 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 NCOA4Q13772 614 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 AMHR2Q16671 573 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 RFX8Q6ZV50 586 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 ZBED8Q8IZ13 594 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 UBA3Q8TBC4 463 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 NSUN6Q8TEA1 469 aaKnown RBP15.96■□□□□ 0.14
VARS2-211ENST00000541562 TEPSINQ96N21 525 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 STRA6Q9BX79 667 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 CALN1Q9BXU9 219 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 OSBPL8Q9BZF1 889 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 WNT8AQ9H1J5 351 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 ZNF302Q9NR11 478 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 KLC4Q9NSK0 619 aa15.96■□□□□ 0.14
VARS2-211ENST00000541562 CD48P09326 243 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 GLRA2P23416 452 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 BACE1P56817 501 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 KCNJ2P63252 427 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 KRT76Q01546 638 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 SCYL2Q6P3W7 929 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 MAP4K3Q8IVH8 894 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 DDX1Q92499 740 aaKnown RBP15.95■□□□□ 0.14
VARS2-211ENST00000541562 INTUQ9ULD6 942 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 SYNJ2BP-COX16A0A087WUM0 186 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 E2F8A0AVK6 867 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 GRIN3BO60391 1043 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 UBOX5O94941 541 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 F7P08709 466 aaPredicted RBP15.95■□□□□ 0.14
VARS2-211ENST00000541562 ARSEP51690 589 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 TRAF1Q13077 416 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 ZNF280CQ8ND82 737 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 OTUD5Q96G74 571 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 LPIN3Q9BQK8 851 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 COX16Q9P0S2 106 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 STK24Q9Y6E0 443 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 MIF4GDA9UHW6 222 aaKnown RBP15.95■□□□□ 0.14
VARS2-211ENST00000541562 RDXP35241 583 aaKnown RBP15.95■□□□□ 0.14
VARS2-211ENST00000541562 LRIG3Q6UXM1 1119 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 SULF1Q8IWU6 871 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 CD302Q8IX05 232 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 RBM15Q96T37 977 aaKnown RBP eCLIP15.95■□□□□ 0.142e-10■■□□□ 13.6
VARS2-211ENST00000541562 MRIQ9BWK5 157 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 AFG3L2Q9Y4W6 797 aa15.95■□□□□ 0.14
VARS2-211ENST00000541562 COL11A2P13942 1736 aaPredicted RBP15.94■□□□□ 0.14
VARS2-211ENST00000541562 RASA4BC9J798 803 aa15.94■□□□□ 0.14
VARS2-211ENST00000541562 RASA4O43374 803 aa15.94■□□□□ 0.14
VARS2-211ENST00000541562 RGS7P49802 495 aa15.94■□□□□ 0.14
VARS2-211ENST00000541562 IRX4P78413 519 aa15.94■□□□□ 0.14
VARS2-211ENST00000541562 TRPC3Q13507 836 aa15.94■□□□□ 0.14
VARS2-211ENST00000541562 SIX1Q15475 284 aaPredicted RBP15.94■□□□□ 0.14
VARS2-211ENST00000541562 SH3PXD2AQ5TCZ1 1133 aa15.94■□□□□ 0.14
VARS2-211ENST00000541562 GPAT2Q6NUI2 795 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms