RNA–Protein interactions for RNA: ENST00000540925.5

USP28-209, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 4

Gene USP28, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-209ENST00000540925 PRPF6O94906 941 aaKnown RBP15.42■□□□□ 0.06
USP28-209ENST00000540925 NFICP08651 508 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 SPATA31D3P0C874 917 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 PFKFB1P16118 471 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 GUCY2FP51841 1108 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 WNT7BP56706 349 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 ASIC1P78348 528 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 CUL4BQ13620 913 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 ATAT1Q5SQI0 421 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 VARS2Q5ST30 1063 aaKnown RBP15.42■□□□□ 0.06
USP28-209ENST00000540925 SPATA31D4Q6ZUB0 917 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 GLYCTKQ8IVS8 523 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 KREMEN2Q8NCW0 462 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 ZNF507Q8TCN5 953 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 POMGNT1Q8WZA1 660 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 RPGRIP1Q96KN7 1286 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 CBWD1Q9BRT8 395 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 C1QTNF1Q9BXJ1 281 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 SCAND2PQ9GZW5 306 aaPredicted RBP15.42■□□□□ 0.06
USP28-209ENST00000540925 TMEM206Q9H813 350 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 ZDHHC7Q9NXF8 308 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 SERTAD1Q9UHV2 236 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 USTQ9Y2C2 406 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 ATP6V1DQ9Y5K8 247 aa15.42■□□□□ 0.06
USP28-209ENST00000540925 CCDC195A0A1B0GUA6 201 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 A0A1B0GVL5 298 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 PVALEFA0A1B0GWK0 134 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 C2CD4DB7Z1M9 353 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 PIRO00625 290 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 PPEF2O14830 753 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 GPR37L1O60883 481 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 ZMYND10O75800 440 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 POU2F2P09086 479 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 ALADP13716 330 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 OR1D2P34982 312 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 FAM26FQ5R3K3 315 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 BRSK2Q8IWQ3 736 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 EFCAB13Q8IY85 973 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 GRAMD1CQ8IYS0 662 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 BLZF1Q9H2G9 400 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 MUTYHQ9UIF7 546 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 PCDHB8Q9UN66 801 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 CDY1Q9Y6F8 540 aa15.41■□□□□ 0.06
USP28-209ENST00000540925 A0A1W2PQ27 194 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 A0A1W2PQ64 194 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 A0A1W2PQD8 194 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 TGFB1I1O43294 461 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 XPOTO43592 962 aaKnown RBP15.4■□□□□ 0.06
USP28-209ENST00000540925 ABLIM3O94929 683 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 IL18RAPO95256 599 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 HOXA9P31269 272 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 TMEM132DQ14C87 1099 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 BMT2Q1RMZ1 405 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 C9orf57Q5W0N0 161 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 ELMSAN1Q6PJG2 1045 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 CXorf38Q8TB03 319 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 SCFD1Q8WVM8 642 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 SAAL1Q96ER3 474 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 PAGE5Q96GU1 130 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 PRKD2Q9BZL6 878 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 WDR6Q9NNW5 1121 aaKnown RBP15.4■□□□□ 0.06
USP28-209ENST00000540925 USP25Q9UHP3 1055 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 NR2E1Q9Y466 385 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 ARIH1Q9Y4X5 557 aaPredicted RBP15.4■□□□□ 0.06
USP28-209ENST00000540925 NUB1Q9Y5A7 615 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 UBE4BO95155 1302 aa15.4■□□□□ 0.06
USP28-209ENST00000540925 SPTLC1O15269 473 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 EXTL3O43909 919 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 N4BP1O75113 896 aaKnown RBP15.39■□□□□ 0.05
USP28-209ENST00000540925 OAZ2O95190 189 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 LDHAP00338 332 aaKnown RBP15.39■□□□□ 0.05
USP28-209ENST00000540925 MCM4P33991 863 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 AFMP43652 599 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 NDUFA8P51970 172 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 LILRA4P59901 499 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 ROR1Q01973 937 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 UVSSAQ2YD98 709 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 STXBP4Q6ZWJ1 553 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 RTL10Q7L3V2 364 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 NT5DC4Q86YG4 428 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 ZDHHC14Q8IZN3 488 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 SYCP3Q8IZU3 236 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 BEST2Q8NFU1 509 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 FAM213AQ9BRX8 229 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 FBXL5Q9UKA1 691 aa15.39■□□□□ 0.05
USP28-209ENST00000540925 TSC2P49815 1807 aa15.38■□□□□ 0.05
USP28-209ENST00000540925 TECTAO75443 2155 aa15.38■□□□□ 0.05
USP28-209ENST00000540925 SCN1AP35498 2009 aa15.38■□□□□ 0.05
USP28-209ENST00000540925 WDR27A2RRH5 827 aa15.38■□□□□ 0.05
USP28-209ENST00000540925 KIAA0391O15091 583 aaKnown RBP15.38■□□□□ 0.05
USP28-209ENST00000540925 MYL1P05976 194 aa15.38■□□□□ 0.05
USP28-209ENST00000540925 HNRNPA1P09651 372 aaKnown RBP eCLIP15.38■□□□□ 0.05
USP28-209ENST00000540925 PAX3P23760 479 aa15.38■□□□□ 0.05
USP28-209ENST00000540925 CEP57L1Q8IYX8 460 aa15.38■□□□□ 0.05
USP28-209ENST00000540925 APPL2Q8NEU8 664 aa15.38■□□□□ 0.05
USP28-209ENST00000540925 ZNF461Q8TAF7 563 aa15.38■□□□□ 0.05
USP28-209ENST00000540925 SMG7Q92540 1137 aaKnown RBP15.38■□□□□ 0.05
USP28-209ENST00000540925 FAM212AQ96EL1 285 aa15.38■□□□□ 0.05
USP28-209ENST00000540925 BORCS6Q96GS4 357 aa15.38■□□□□ 0.05
USP28-209ENST00000540925 LRFN3Q9BTN0 628 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms