RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PFASO15067 1338 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 IGSF9BQ9UPX0 1349 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 USP17L5A8MUK1 530 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 K7ENM7 598 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 ATP5HO75947 161 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 NPTXRO95502 500 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 IFNB1P01574 187 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 ASNSP08243 561 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 GNAZP19086 355 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 ATP6V1C1P21283 382 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 CALB2P22676 271 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 VPS41P49754 854 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 SETDB1Q15047 1291 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 PARP6Q2NL67 630 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 CMPK2Q5EBM0 449 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 MTHFD1LQ6UB35 978 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 VSTM1Q6UX27 236 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 TRMT10CQ7L0Y3 403 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 VSIG1Q86XK7 387 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 GLYCTKQ8IVS8 523 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 HACE1Q8IYU2 909 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 UBL4BQ8N7F7 174 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 ATL2Q8NHH9 583 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 TTC8Q8TAM2 541 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 SLC7A3Q8WY07 619 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 FAM149B1Q96BN6 582 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 NLRP4Q96MN2 994 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 SERPINB12Q96P63 405 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 NAP1L4Q99733 375 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 SLX1AQ9BQ83 275 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 MED10Q9BTT4 135 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 DDX23Q9BUQ8 820 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 IDI2Q9BXS1 227 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 METTL14Q9HCE5 456 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 SIX2Q9NPC8 291 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 CYP39A1Q9NYL5 469 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 PRKAG3Q9UGI9 489 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 EXOC7Q9UPT5 735 aa5.55□□□□□ -1.52
PROM1-220ENST00000540805 FNDC3AQ9Y2H6 1198 aaKnown RBP5.55□□□□□ -1.52
PROM1-220ENST00000540805 PASKQ96RG2 1323 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 CAPN9O14815 690 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 ZBTB24O43167 697 aaPredicted RBP5.54□□□□□ -1.52
PROM1-220ENST00000540805 CYP1A1P04798 512 aaPredicted RBP5.54□□□□□ -1.52
PROM1-220ENST00000540805 ZCCHC18P0CG32 403 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 CREB1P16220 341 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 VCAM1P19320 739 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 OSBPP22059 807 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 STAT2P52630 851 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 LMNB2Q03252 620 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 CALCOCO2Q13137 446 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 ACVR2BQ13705 512 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 GJB7Q6PEY0 223 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 CCDC137Q6PK04 289 aaKnown RBP5.54□□□□□ -1.52
PROM1-220ENST00000540805 RFX8Q6ZV50 586 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 CYFIP1Q7L576 1253 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 PIGOQ8TEQ8 1089 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 STK32AQ8WU08 396 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 CRYGNQ8WXF5 182 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 POMGNT1Q8WZA1 660 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 GRAMD1AQ96CP6 724 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 CEP170P1Q96L14 293 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 SH2D3AQ9BRG2 576 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 ZNF577Q9BSK1 485 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 RAVER2Q9HCJ3 691 aaKnown RBP5.54□□□□□ -1.52
PROM1-220ENST00000540805 NKIRAS1Q9NYS0 192 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 PCYOX1Q9UHG3 505 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 INPP5FQ9Y2H2 1132 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 LRRC42Q9Y546 428 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 SPDYE16A6NNV3 312 aaPredicted RBP5.54□□□□□ -1.52
PROM1-220ENST00000540805 MIF4GDA9UHW6 222 aaKnown RBP5.54□□□□□ -1.52
PROM1-220ENST00000540805 PEX11AO75192 247 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 GGPS1O95749 300 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 TMEM191BP0C7N4 346 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 SP100P23497 879 aaPredicted RBP5.54□□□□□ -1.52
PROM1-220ENST00000540805 SMARCA1P28370 1054 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 SOX5P35711 763 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 GCLCP48506 637 aaPredicted RBP5.54□□□□□ -1.52
PROM1-220ENST00000540805 USP46P62068 366 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 KLC1Q07866 573 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 LBRQ14739 615 aaKnown RBP5.54□□□□□ -1.52
PROM1-220ENST00000540805 SPDYE2Q495Y8 402 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 HYIQ5T013 277 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 ARHGEF18Q6ZSZ5 1173 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 SAMD7Q7Z3H4 446 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 MCF2L2Q86YR7 1114 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 CDAN1Q8IWY9 1227 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 CCDC105Q8IYK2 499 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 PRELID2Q8N945 189 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 ALG3Q92685 438 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 ARHGEF26Q96DR7 871 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 MAGEB18Q96M61 343 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 LRMDAQ9H2I8 198 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 VCXQ9H320 206 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 CDC42EP4Q9H3Q1 356 aaKnown RBP5.54□□□□□ -1.52
PROM1-220ENST00000540805 ETNK2Q9NVF9 386 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 NXF1Q9UBU9 619 aaKnown RBP5.54□□□□□ -1.52
PROM1-220ENST00000540805 TRAF3IP3Q9Y228 551 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 SFI1A8K8P3 1242 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 ENTPD5O75356 428 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 NPM3O75607 178 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms