RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ACER1Q8TDN7 264 aa14.08□□□□□ -0.16
UBE3B-209ENST00000539584 OSBPL8Q9BZF1 889 aa14.08□□□□□ -0.16
UBE3B-209ENST00000539584 LRMDAQ9H2I8 198 aa14.08□□□□□ -0.16
UBE3B-209ENST00000539584 SSU72Q9NP77 194 aaKnown RBP14.08□□□□□ -0.16
UBE3B-209ENST00000539584 SLX4Q8IY92 1834 aa14.08□□□□□ -0.16
UBE3B-209ENST00000539584 GSTTP1A0A1W2PQM5 241 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 GOLGA8IPA6NC78 632 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 GOLGA8JA6NMD2 632 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 ASMTLO95671 621 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 RALAP11233 206 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 RRM1P23921 792 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 KLRC2P26717 231 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 NPTX2P47972 431 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 MCL1Q07820 350 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 GRIPAP1Q4V328 841 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 XRRA1Q6P2D8 792 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 C15orf39Q6ZRI6 1047 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 MON1BQ7L1V2 547 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 TRABD2AQ86V40 505 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 ZNF398Q8TD17 642 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 KCNN1Q92952 543 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 RBM41Q96IZ5 413 aaKnown RBP14.07□□□□□ -0.16
UBE3B-209ENST00000539584 RBM15Q96T37 977 aaKnown RBP eCLIP14.07□□□□□ -0.16
UBE3B-209ENST00000539584 ACP6Q9NPH0 428 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 KMT5AQ9NQR1 393 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 CCPG1Q9ULG6 757 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 ATP2A1O14983 1001 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 ACCSLQ4AC99 568 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 FAM102BQ5T8I3 360 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 LRRC38Q5VT99 294 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 STYK1Q6J9G0 422 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 CPNE8Q86YQ8 564 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 RCOR2Q8IZ40 523 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 GDAP1Q8TB36 358 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 ATG4AQ8WYN0 398 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 POMGNT1Q8WZA1 660 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 LRRC37BQ96QE4 947 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 CTNNAL1Q9UBT7 734 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 SLC24A2Q9UI40 661 aa14.07□□□□□ -0.16
UBE3B-209ENST00000539584 DRG1Q9Y295 367 aaKnown RBP14.07□□□□□ -0.16
UBE3B-209ENST00000539584 EXOC1LA0A1B0GW35 172 aa14.06□□□□□ -0.16
UBE3B-209ENST00000539584 DENND3A2RUS2 1198 aa14.06□□□□□ -0.16
UBE3B-209ENST00000539584 RPSAP08865 295 aaKnown RBP14.06□□□□□ -0.16
UBE3B-209ENST00000539584 C1QBPQ07021 282 aaKnown RBP14.06□□□□□ -0.16
UBE3B-209ENST00000539584 NAA25Q14CX7 972 aa14.06□□□□□ -0.16
UBE3B-209ENST00000539584 MORF4L2Q15014 288 aa14.06□□□□□ -0.16
UBE3B-209ENST00000539584 PDK4Q16654 411 aa14.06□□□□□ -0.16
UBE3B-209ENST00000539584 XKR9Q5GH70 373 aa14.06□□□□□ -0.16
UBE3B-209ENST00000539584 FKBP1CQ5VVH2 108 aa14.06□□□□□ -0.16
UBE3B-209ENST00000539584 CGB2Q6NT52 195 aa14.06□□□□□ -0.16
UBE3B-209ENST00000539584 ECHDC2Q86YB7 292 aa14.06□□□□□ -0.16
UBE3B-209ENST00000539584 PHF13Q86YI8 300 aaPredicted RBP14.06□□□□□ -0.16
UBE3B-209ENST00000539584 CYP4X1Q8N118 509 aa14.06□□□□□ -0.16
UBE3B-209ENST00000539584 ZSWIM2Q8NEG5 633 aa14.06□□□□□ -0.16
UBE3B-209ENST00000539584 DENND1AQ8TEH3 1009 aa14.06□□□□□ -0.16
UBE3B-209ENST00000539584 PRMT6Q96LA8 375 aaPredicted RBP14.06□□□□□ -0.16
UBE3B-209ENST00000539584 SENP7Q9BQF6 1050 aa14.06□□□□□ -0.16
UBE3B-209ENST00000539584 L3MBTL1Q9Y468 752 aa14.06□□□□□ -0.16
UBE3B-209ENST00000539584 UMODL1Q5DID0 1318 aa14.06□□□□□ -0.16
UBE3B-209ENST00000539584 TRAFD1O14545 582 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-209ENST00000539584 DNALI1O14645 258 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-209ENST00000539584 MAFGO15525 162 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 TJP3O95049 919 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 GH1P01241 217 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 PTPN7P35236 360 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 CAP2P40123 477 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 MKRN4PQ13434 485 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-209ENST00000539584 CMPK2Q5EBM0 449 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 TMEM63BQ5T3F8 832 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 PLEKHA7Q6IQ23 1121 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 GSTA5Q7RTV2 222 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 TEX9Q8N6V9 391 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 MCPH1Q8NEM0 835 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 SUPT20HQ8NEM7 779 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 FLAD1Q8NFF5 587 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 SAAL1Q96ER3 474 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 RMDN2Q96LZ7 410 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 SMC6Q96SB8 1091 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 TRIM6Q9C030 488 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-209ENST00000539584 ETNK1Q9HBU6 452 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 IP6K2Q9UHH9 426 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 BCS1LQ9Y276 419 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 ZBED4O75132 1171 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 FDX1P10109 184 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 RNASELQ05823 741 aaKnown RBP14.05□□□□□ -0.16
UBE3B-209ENST00000539584 MOGSQ13724 837 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 CCDC142Q17RM4 750 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 EAPPQ56P03 285 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-209ENST00000539584 PCGF5Q86SE9 256 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 VSIG1Q86XK7 387 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 TUBB6Q9BUF5 446 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 PARVAQ9NVD7 372 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 SLC5A4Q9NY91 659 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 ADAM22Q9P0K1 906 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 TBK1Q9UHD2 729 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 PHTF1Q9UMS5 762 aa14.05□□□□□ -0.16
UBE3B-209ENST00000539584 ZNF646O15015 1829 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-209ENST00000539584 EXTL3O43909 919 aa14.04□□□□□ -0.16
UBE3B-209ENST00000539584 CETPP11597 493 aa14.04□□□□□ -0.16
UBE3B-209ENST00000539584 TBXAS1P24557 533 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms