RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 C2orf71A6NGG8 1288 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 F5H0A9 414 aaPredicted RBP4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 H3BML4 177 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 STXBP3O00186 592 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 EIF3FO00303 357 aaPredicted RBP4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 CSTBP04080 98 aaKnown RBP4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 SOD2P04179 222 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 KCNA6P17658 529 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 ABCB4P21439 1286 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 LSP1P33241 339 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 PRIM2P49643 509 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 LBX1P52954 281 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 ATXN1P54253 815 aaKnown RBP4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 CACNB3P54284 484 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 ARL4CP56559 192 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 KIAA2012Q0VF49 1180 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 SMC1AQ14683 1233 aaKnown RBP4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 KIR3DS1Q14943 382 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 NTRK3Q16288 839 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 TAF12Q16514 161 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 PRSS53Q2L4Q9 553 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 TTC31Q49AM3 519 aaPredicted RBP4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 TMEM177Q53S58 311 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 SLC45A4Q5BKX6 768 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 RILPL1Q5EBL4 403 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 IZUMO3Q5VZ72 239 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 PAQR3Q6TCH7 311 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 KCNT2Q6UVM3 1135 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 TMCO3Q6UWJ1 677 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 KIAA0319LQ8IZA0 1049 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 TEX9Q8N6V9 391 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 CHTF18Q8WVB6 975 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 DDX17Q92841 729 aaKnown RBP4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 ARL8AQ96BM9 186 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 TBC1D31Q96DN5 1066 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 LTV1Q96GA3 475 aaPredicted RBP4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 SPAG5Q96R06 1193 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 RBM15Q96T37 977 aaKnown RBP eCLIP4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 MAP3K14Q99558 947 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 APOL5Q9BWW9 433 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 CELF4Q9BZC1 486 aaKnown RBP4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 GTPBP4Q9BZE4 634 aaKnown RBP4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 NUP62CLQ9H1M0 184 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 BHMT2Q9H2M3 363 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 TSPY26PQ9H489 355 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 BRD9Q9H8M2 597 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 DBNDD1Q9H9R9 158 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 ZCCHC17Q9NP64 241 aaKnown RBP4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 WASH6PQ9NQA3 447 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 ARGLU1Q9NWB6 273 aaPredicted RBP4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 IFT80Q9P2H3 777 aaPredicted RBP4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 NFKBIL1Q9UBC1 381 aaPredicted RBP4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 ACSL6Q9UKU0 697 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 PADI4Q9UM07 663 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 COQ6Q9Y2Z9 468 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 CACNA1BQ00975 2339 aa4.33□□□□□ -1.72
AC055720.1-201ENST00000539552 CFAP54Q96N23 3096 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 FSD2A1L4K1 749 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 CCDC66A2RUB6 948 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 GOLGA8AA7E2F4 631 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 GOLGA8BA8MQT2 603 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 SIGLEC6O43699 453 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 TBX18O95935 607 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 PLA2G1BP04054 148 aaKnown RBP4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 CYBBP04839 570 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 GYS1P13807 737 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 PAMP19021 973 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 TNFSF4P23510 183 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 PEX2P28328 305 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 STAT1P42224 750 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 TECP42680 631 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 TDO2P48775 406 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 CTCFP49711 727 aaPredicted RBP4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 CASP5P51878 434 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 COPAP53621 1224 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 ADKP55263 362 aaKnown RBP4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 GRM1Q13255 1194 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 PLCB4Q15147 1175 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 DNAJC21Q5F1R6 531 aaKnown RBP4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 HECTD3Q5T447 861 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 CCDC30Q5VVM6 783 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 BICRALQ6AI39 1079 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 ABHD17CQ6PCB6 329 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 CRIP3Q6Q6R5 217 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 LBX2Q6XYB7 198 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 ANKRD13BQ86YJ7 626 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 ERC1Q8IUD2 1116 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 DENND1CQ8IV53 801 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 GRAMD1CQ8IYS0 662 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 LGI4Q8N135 537 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 MIER2Q8N344 545 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 EFHBQ8N7U6 833 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 ARL10Q8N8L6 244 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 NLGN2Q8NFZ4 835 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 PPP1R35Q8TAP8 253 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 SSH1Q8WYL5 1049 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 LRRC59Q96AG4 307 aaKnown RBP4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 SH3KBP1Q96B97 665 aa4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 ZSCAN31Q96LW9 406 aaPredicted RBP4.32□□□□□ -1.72
AC055720.1-201ENST00000539552 NT5C1BQ96P26 610 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms