RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 SPOPLQ6IQ16 392 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 MFSD5Q6N075 450 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 RAD9BQ6WBX8 426 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 ZNF365Q70YC5 407 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 RRAGAQ7L523 313 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 TRAPPC11Q7Z392 1133 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 RTN4RL1Q86UN2 441 aaPredicted RBP9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 ZNF710Q8N1W2 664 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 OR8K1Q8NGG5 319 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 KREMEN1Q96MU8 473 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 ZMAT2Q96NC0 199 aaKnown RBP9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 ACAP3Q96P50 834 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 PANX2Q96RD6 677 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 DNAJC7Q99615 494 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 ADPGKQ9BRR6 497 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 EDEM3Q9BZQ6 932 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 MTMR12Q9C0I1 747 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 GPR88Q9GZN0 384 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 CEP72Q9P209 647 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 DNAJC12Q9UKB3 198 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 ZKSCAN5Q9Y2L8 839 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 LUC7L2Q9Y383 392 aaKnown RBP9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 IPPQ9Y573 584 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 MTCH2Q9Y6C9 303 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 SCN1AP35498 2009 aa9.9□□□□□ -0.82
RTN4IP1-204ENST00000539449 CACNA1BQ00975 2339 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 SOWAHDA6NJG2 315 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 STX10O60499 249 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 RECQL4O94761 1208 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 PLEKP08567 350 aaPredicted RBP9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 POU3F3P20264 500 aaPredicted RBP9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 JAM2P57087 298 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 TFAMQ00059 246 aaKnown RBP9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 NCBP1Q09161 790 aaKnown RBP9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 BIRC3Q13489 604 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 PCBP1Q15365 356 aaKnown RBP eCLIP9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 SURF1Q15526 300 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 ARHGAP44Q17R89 818 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 ALKAL1Q6UXT8 129 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 WDR49Q8IV35 697 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 CNGA4Q8IV77 575 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 FBXL13Q8NEE6 735 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 CXorf38Q8TB03 319 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 HELQQ8TDG4 1101 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 LINC01599Q8WXQ3 324 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 LPPQ93052 612 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 HLA-CQ95604 372 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 BAG1Q99933 345 aaPredicted RBP9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 CCDC94Q9BW85 323 aaPredicted RBP9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 APOBEC3GQ9HC16 384 aaKnown RBP9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 UBE2TQ9NPD8 197 aaPredicted RBP9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 RAB20Q9NX57 234 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 SIX4Q9UIU6 781 aa9.89□□□□□ -0.83
RTN4IP1-204ENST00000539449 A0A0U1RQJ8 604 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 RFXAPO00287 272 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 PPEF2O14830 753 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 GPR182O15218 404 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 NBNO60934 754 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 CAND2O75155 1236 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 IL18RAPO95256 599 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 RPLP2P05387 115 aaKnown RBP9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 TPM1P09493 284 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 ACRP10323 421 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 ALADP13716 330 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 CSF2RAP15509 400 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 ATF7P17544 494 aaPredicted RBP9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 IBSPP21815 317 aaPredicted RBP9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 HNRNPH3P31942 346 aaKnown RBP9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 PIK3CAP42336 1068 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 AFF1P51825 1210 aaKnown RBP9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 MYL6P60660 151 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 PAK2Q13177 524 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 DRAP1Q14919 205 aaPredicted RBP9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 ZBTB6Q15916 424 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 DUOXA2Q1HG44 320 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 GLRA4Q5JXX5 417 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 PPP2R2DQ66LE6 453 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 HGSNATQ68CP4 663 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 TWF2Q6IBS0 349 aaKnown RBP9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 PSRC1Q6PGN9 363 aaPredicted RBP9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 LRRC8DQ7L1W4 858 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 ANKRD33Q7Z3H0 272 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 CACNA2D4Q7Z3S7 1137 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 GJD3Q8N144 294 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 C1orf127Q8N9H9 656 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 OLIG1Q8TAK6 271 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 KIAA1524Q8TCG1 905 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 ATRIPQ8WXE1 791 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 C18orf25Q96B23 403 aaPredicted RBP9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 CCDC51Q96ER9 411 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 TOX2Q96NM4 488 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 MIOSQ9NXC5 875 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 ARHGAP20Q9P2F6 1191 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 APEX2Q9UBZ4 518 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 PARP2Q9UGN5 583 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 NUB1Q9Y5A7 615 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 PCDHB2Q9Y5E7 798 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 CACNA1GO43497 2377 aa9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 TDRD15B5MCY1 1934 aaKnown RBP9.88□□□□□ -0.83
RTN4IP1-204ENST00000539449 ZFHX2Q9C0A1 2572 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms