RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ERAP1Q9NZ08 941 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 MYO1FO00160 1098 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 RPS6KA5O75582 802 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 KRT14P02533 472 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 PROZP22891 400 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 ZNF132P52740 706 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 DRG2P55039 364 aaKnown RBP16.71■□□□□ 0.27
MKS1-204ENST00000537529 ZNF568Q3ZCX4 644 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 PHF13Q86YI8 300 aaPredicted RBP16.71■□□□□ 0.27
MKS1-204ENST00000537529 GPRC5AQ8NFJ5 357 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 C18orf8Q96DM3 657 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 TRIM31Q9BZY9 425 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 NIF3L1Q9GZT8 377 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 FZD8Q9H461 694 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 EFCC1Q9HA90 598 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 MRPL47Q9HD33 250 aaKnown RBP16.71■□□□□ 0.27
MKS1-204ENST00000537529 PDGFCQ9NRA1 345 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 ADAM22Q9P0K1 906 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 CALCOCO1Q9P1Z2 691 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.71■□□□□ 0.27
MKS1-204ENST00000537529 SCINQ9Y6U3 715 aa16.71■□□□□ 0.27
MKS1-204ENST00000537529 GOLGA6L10A6NI86 522 aa16.7■□□□□ 0.26
MKS1-204ENST00000537529 INO80B-WBP1J3KQ70 363 aa16.7■□□□□ 0.26
MKS1-204ENST00000537529 PODXLO00592 558 aa16.7■□□□□ 0.26
MKS1-204ENST00000537529 PTGIRP43119 386 aa16.7■□□□□ 0.26
MKS1-204ENST00000537529 C1QBPQ07021 282 aaKnown RBP16.7■□□□□ 0.26
MKS1-204ENST00000537529 TRPC3Q13507 836 aa16.7■□□□□ 0.26
MKS1-204ENST00000537529 LAMC2Q13753 1193 aa16.7■□□□□ 0.26
MKS1-204ENST00000537529 ZSCAN26Q16670 478 aa16.7■□□□□ 0.26
MKS1-204ENST00000537529 SGSM1Q2NKQ1 1148 aa16.7■□□□□ 0.26
MKS1-204ENST00000537529 ZNF484Q5JVG2 852 aa16.7■□□□□ 0.26
MKS1-204ENST00000537529 EFCAB12Q6NXP0 572 aa16.7■□□□□ 0.26
MKS1-204ENST00000537529 TMC3Q7Z5M5 1100 aa16.7■□□□□ 0.26
MKS1-204ENST00000537529 PASD1Q8IV76 773 aa16.7■□□□□ 0.26
MKS1-204ENST00000537529 FMO2Q99518 471 aa16.7■□□□□ 0.26
MKS1-204ENST00000537529 C11orf70Q9BRQ4 267 aa16.7■□□□□ 0.26
MKS1-204ENST00000537529 INO80BQ9C086 356 aaPredicted RBP16.7■□□□□ 0.26
MKS1-204ENST00000537529 TNNC2P02585 160 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 TMEM191BP0C7N4 346 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 CYP2C8P10632 490 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 FNTAP49354 379 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 CLCN3P51790 818 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 ARHGAP1Q07960 439 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 CCDC137Q6PK04 289 aaKnown RBP16.69■□□□□ 0.26
MKS1-204ENST00000537529 C12orf50Q8NA57 414 aaPredicted RBP16.69■□□□□ 0.26
MKS1-204ENST00000537529 MAIP1Q8WWC4 291 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 PTPRHQ9HD43 1115 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 VTA1Q9NP79 307 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 SHOX2O60902 331 aaPredicted RBP16.69■□□□□ 0.26
MKS1-204ENST00000537529 PROSCO94903 275 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 C22orf31O95567 290 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 GH1P01241 217 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 PHKA2P46019 1235 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 MYL6P60660 151 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 TFAMQ00059 246 aaKnown RBP16.69■□□□□ 0.26
MKS1-204ENST00000537529 MBTD1Q05BQ5 628 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 UAP1Q16222 522 aaPredicted RBP16.69■□□□□ 0.26
MKS1-204ENST00000537529 SPDYCQ5MJ68 293 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 CEP85LQ5SZL2 805 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 UBLCP1Q8WVY7 318 aaPredicted RBP16.69■□□□□ 0.26
MKS1-204ENST00000537529 ANKRD36BP1Q96IX9 119 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 NFKBIZQ9BYH8 718 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 PARP2Q9UGN5 583 aa16.69■□□□□ 0.26
MKS1-204ENST00000537529 UNCXA6NJT0 531 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 HMGB1P1B2RPK0 211 aaPredicted RBP16.68■□□□□ 0.26
MKS1-204ENST00000537529 IL18RAPO95256 599 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 LSM8O95777 96 aaKnown RBP16.68■□□□□ 0.26
MKS1-204ENST00000537529 CST3P01034 146 aaPredicted RBP16.68■□□□□ 0.26
MKS1-204ENST00000537529 IVLP07476 585 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 CFHP08603 1231 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 HOXC6P09630 235 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 RARAP10276 462 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 COILP38432 576 aaPredicted RBP16.68■□□□□ 0.26
MKS1-204ENST00000537529 DHX9Q08211 1270 aaKnown RBP16.68■□□□□ 0.26
MKS1-204ENST00000537529 ZNF792Q3KQV3 632 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 TMEM63BQ5T3F8 832 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 TTC27Q6P3X3 843 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 MMS22LQ6ZRQ5 1243 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 THNSL1Q8IYQ7 743 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 TRIM7Q9C029 511 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 ZDHHC18Q9NUE0 388 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 PRMT7Q9NVM4 692 aaPredicted RBP16.68■□□□□ 0.26
MKS1-204ENST00000537529 CWC15Q9P013 229 aaKnown RBP16.68■□□□□ 0.26
MKS1-204ENST00000537529 TNFSF13BQ9Y275 285 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 SLC45A1Q9Y2W3 748 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 TCRBV7S2A1N4TA0A589 114 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 IQCA1LA6NCM1 817 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 A6NNZ2 444 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 FSCN2O14926 492 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 B4GALT4O60513 344 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 PPFIA2O75334 1257 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 LGALS2P05162 132 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 GJB1P08034 283 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 CETPP11597 493 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 FLT3P36888 993 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 YWHAEP62258 255 aaKnown RBP16.68■□□□□ 0.26
MKS1-204ENST00000537529 SKOR1P84550 965 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 PTP4A2Q12974 167 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 SIX1Q15475 284 aaPredicted RBP16.68■□□□□ 0.26
MKS1-204ENST00000537529 ZNF699Q32M78 642 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms