RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	AFF4	Q9UHB7	1163 aa	Known RBP	6.59	□□□□□ -1.35
PRKDC-208	ENST00000536710	TBKBP1	A7MCY6	615 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	PRR5-ARHGAP8	B1AHC4	643 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	PJA2	O43164	708 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	HAUS5	O94927	633 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	IL18RAP	O95256	599 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	POMC	P01189	267 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	AMH	P03971	560 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	HABP2	Q14520	560 aa	Predicted RBP	6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	GRM7	Q14831	915 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	C3orf38	Q5JPI3	329 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	FAM83B	Q5T0W9	1011 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	FAM83A	Q86UY5	434 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	TAX1BP1	Q86VP1	789 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	SP8	Q8IXZ3	490 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	RNF169	Q8NCN4	708 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	GIMAP8	Q8ND71	665 aa	Predicted RBP	6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	ZFP28	Q8NHY6	868 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	POF1B	Q8WVV4	589 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	KBTBD7	Q8WVZ9	684 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	PHACTR3	Q96KR7	559 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	PLA2G12B	Q9BX93	195 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	TRIM54	Q9BYV2	358 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	NELFA	Q9H3P2	528 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	SEC61A2	Q9H9S3	476 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	GPRC5B	Q9NZH0	403 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	POGK	Q9P215	609 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	LRCH1	Q9Y2L9	728 aa		6.58	□□□□□ -1.36
PRKDC-208	ENST00000536710	ZNF536	O15090	1300 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	PNPLA7	Q6ZV29	1317 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	ZNF785	A8K8V0	405 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	BTN3A1	O00481	513 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	SLC43A1	O75387	559 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	TCEA3	O75764	348 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	RARB	P10826	455 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	ABCB4	P21439	1286 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	SLC6A4	P31645	630 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	SLC13A2	Q13183	592 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	DAG1	Q14118	895 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	KIF22	Q14807	665 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	UBXN2B	Q14CS0	331 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	SURF1	Q15526	300 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	BMT2	Q1RMZ1	405 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	SLC44A4	Q53GD3	710 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	UTP14C	Q5TAP6	766 aa	Known RBP	6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	EMC10	Q5UCC4	262 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	KLHDC7A	Q5VTJ3	777 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	ANO1	Q5XXA6	986 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	MFSD5	Q6N075	450 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	EFCAB12	Q6NXP0	572 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	ZNF365	Q70YC5	407 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	MPP5	Q8N3R9	675 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	SYT8	Q8NBV8	401 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	KIAA1191	Q96A73	305 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	SELENOO	Q9BVL4	669 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	FBXO34	Q9NWN3	711 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	JKAMP	Q9P055	326 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	SLC45A2	Q9UMX9	530 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	CEP83	Q9Y592	693 aa		6.57	□□□□□ -1.36
PRKDC-208	ENST00000536710	CDHR4	A6H8M9	788 aa		6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710		F8W8V4	182 aa		6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710	LAMTOR5	O43504	91 aa		6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710	RPS19	P39019	145 aa	Known RBP	6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710	MAPK10	P53779	464 aa		6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710	RPS16	P62249	146 aa	Known RBP	6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710	TRIM14	Q14142	442 aa		6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710	IZUMO3	Q5VZ72	239 aa		6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710	FRMD5	Q7Z6J6	570 aa		6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710	ELOA2	Q8IYF1	753 aa	Predicted RBP	6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710	TBC1D15	Q8TC07	691 aa		6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710	BORCS6	Q96GS4	357 aa		6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710	GNRHR2	Q96P88	292 aa		6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710	CRB3	Q9BUF7	120 aa		6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710	CDC23	Q9UJX2	597 aa		6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710	PADI4	Q9UM07	663 aa		6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710	MED16	Q9Y2X0	877 aa		6.56	□□□□□ -1.36
PRKDC-208	ENST00000536710	MYO1C	O00159	1063 aa		6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	APOL1	O14791	398 aa		6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	CREB3	O43889	395 aa		6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	AGFG2	O95081	481 aa		6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	UNC5C	O95185	931 aa		6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	ITGB1	P05556	798 aa		6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	TSHR	P16473	764 aa		6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	ZNF135	P52742	658 aa	Predicted RBP	6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	ARFIP2	P53365	341 aa		6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	DUSP8	Q13202	625 aa		6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	RAB32	Q13637	225 aa		6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	ELAVL1	Q15717	326 aa	Known RBP	6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	LMBRD2	Q68DH5	695 aa	Predicted RBP	6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	HIBCH	Q6NVY1	386 aa	Predicted RBP	6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	DOK3	Q7L591	496 aa		6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	FITM2	Q8N6M3	262 aa		6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	MB21D1	Q8N884	522 aa		6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	ST8SIA2	Q92186	375 aa		6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	LSM14B	Q9BX40	385 aa	Known RBP	6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	MSL2	Q9HCI7	577 aa		6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	TRMT13	Q9NUP7	481 aa	Known RBP	6.55	□□□□□ -1.36
PRKDC-208	ENST00000536710	RLIM	Q9NVW2	624 aa		6.55	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms