RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 PLCB3Q01970 1234 aa8.78□□□□□ -1
ABCA4-207ENST00000536513 BEND6Q5SZJ8 279 aaPredicted RBP8.78□□□□□ -1
ABCA4-207ENST00000536513 IER5Q5VY09 327 aa8.78□□□□□ -1
ABCA4-207ENST00000536513 SLC39A4Q6P5W5 647 aa8.78□□□□□ -1
ABCA4-207ENST00000536513 TSHZ1Q6ZSZ6 1077 aa8.78□□□□□ -1
ABCA4-207ENST00000536513 ARFGAP2Q8N6H7 521 aa8.78□□□□□ -1
ABCA4-207ENST00000536513 NOA1Q8NC60 698 aaKnown RBP8.78□□□□□ -1
ABCA4-207ENST00000536513 OR6B3Q8NGW1 331 aa8.78□□□□□ -1
ABCA4-207ENST00000536513 HAUS1Q96CS2 278 aa8.78□□□□□ -1
ABCA4-207ENST00000536513 SELENOSQ9BQE4 189 aa8.78□□□□□ -1
ABCA4-207ENST00000536513 XPNPEP3Q9NQH7 507 aa8.78□□□□□ -1
ABCA4-207ENST00000536513 PLAGL2Q9UPG8 496 aa8.78□□□□□ -1
ABCA4-207ENST00000536513 REXO2Q9Y3B8 237 aaKnown RBP8.78□□□□□ -1
ABCA4-207ENST00000536513 SIPA1L1O43166 1804 aa8.78□□□□□ -1
ABCA4-207ENST00000536513 ATP2A1O14983 1001 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 GALCP54803 685 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 BCAR1P56945 870 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 NOP14P78316 857 aaKnown RBP8.77□□□□□ -1.01
ABCA4-207ENST00000536513 SP3Q02447 781 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 MOGSQ13724 837 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 SCYL2Q6P3W7 929 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 ANKRD23Q86SG2 305 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 HEMGNQ9BXL5 484 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 DONSONQ9NYP3 566 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 NUB1Q9Y5A7 615 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 MAFBQ9Y5Q3 323 aaPredicted RBP8.77□□□□□ -1.01
ABCA4-207ENST00000536513 ZMYM2Q9UBW7 1377 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 KNL1Q8NG31 2342 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 SOCS7O14512 581 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 STAM2O75886 525 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 STAG3L1P0CL83 205 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 SMIM10L2AP0DMW4 78 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 SMIM10L2BP0DMW5 78 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 CCND3P30281 292 aaPredicted RBP8.77□□□□□ -1.01
ABCA4-207ENST00000536513 POLR2BP30876 1174 aaKnown RBP8.77□□□□□ -1.01
ABCA4-207ENST00000536513 SOX5P35711 763 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 PBX1P40424 430 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 RABGGTBP53611 331 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 CYP24A1Q07973 514 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 SNX1Q13596 522 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 MXD4Q14582 209 aaPredicted RBP8.77□□□□□ -1.01
ABCA4-207ENST00000536513 MFSD10Q14728 455 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 CYP4A22Q5TCH4 519 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 UHMK1Q8TAS1 419 aaKnown RBP8.77□□□□□ -1.01
ABCA4-207ENST00000536513 UBA3Q8TBC4 463 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 COG1Q8WTW3 980 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 ANKRD36BP1Q96IX9 119 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 ZFP42Q96MM3 310 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 FIZ1Q96SL8 496 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 THAP2Q9H0W7 228 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 KAT6AQ92794 2004 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 MMP3P08254 477 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 NFICP08651 508 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 ZBTB48P10074 688 aaPredicted RBP8.77□□□□□ -1.01
ABCA4-207ENST00000536513 NAMPTP43490 491 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 GTF2BQ00403 316 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 NAIF1Q69YI7 327 aaPredicted RBP8.77□□□□□ -1.01
ABCA4-207ENST00000536513 TRIM68Q6AZZ1 485 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 TAPT1Q6NXT6 567 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 MAP4K3Q8IVH8 894 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 CCDC33Q8N5R6 958 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 FGD4Q96M96 766 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 PPP1R12CQ9BZL4 782 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 MIS12Q9H081 205 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 RNF186Q9NXI6 227 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 KCND2Q9NZV8 630 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 SALL4Q9UJQ4 1053 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 PTPN22Q9Y2R2 807 aa8.77□□□□□ -1.01
ABCA4-207ENST00000536513 MYH10P35580 1976 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 DOCK5Q9H7D0 1870 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 ENO4A6NNW6 628 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 SKAP2O75563 359 aaPredicted RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 MAP3K6O95382 1288 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 POMCP01189 267 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 ARF4P18085 180 aaPredicted RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 DYNLT1P63172 113 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 KCNV1Q6PIU1 500 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 EPM2AIP1Q7L775 607 aaPredicted RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 MORC4Q8TE76 937 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 UBLCP1Q8WVY7 318 aaPredicted RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 LPIN3Q9BQK8 851 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 NXF3Q9H4D5 531 aaKnown RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 DHX33Q9H6R0 707 aaKnown RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 PRDM5Q9NQX1 630 aaPredicted RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 GPR25O00155 361 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 PQBP1O60828 265 aaKnown RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 TOM1L1O75674 476 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 VIMP08670 466 aaKnown RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 IQCF3P0C7M6 154 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 ADORA2BP29275 332 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 NSFP46459 744 aaKnown RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 IRAK1P51617 712 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 RPS6KA1Q15418 735 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 TRIP13Q15645 432 aaPredicted RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 DUOXA2Q1HG44 320 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 DUSP28Q4G0W2 176 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 SYCP2LQ5T4T6 812 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 HIBCHQ6NVY1 386 aaPredicted RBP8.76□□□□□ -1.01
ABCA4-207ENST00000536513 RUFY4Q6ZNE9 571 aa8.76□□□□□ -1.01
ABCA4-207ENST00000536513 TAS1R3Q7RTX0 852 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms