RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 CLCNKBP51801 687 aa14.67□□□□□ -0.06
RPAIN-205ENST00000536255 ELAVL2Q12926 359 aaKnown RBP14.67□□□□□ -0.06
RPAIN-205ENST00000536255 SMAD2Q15796 467 aaKnown RBP14.67□□□□□ -0.06
RPAIN-205ENST00000536255 UPP1Q16831 310 aa14.67□□□□□ -0.06
RPAIN-205ENST00000536255 DCLRE1AQ6PJP8 1040 aa14.67□□□□□ -0.06
RPAIN-205ENST00000536255 CRELD2Q6UXH1 353 aaPredicted RBP14.67□□□□□ -0.06
RPAIN-205ENST00000536255 PPFIBP1Q86W92 1011 aa14.67□□□□□ -0.06
RPAIN-205ENST00000536255 SLC9A9Q8IVB4 645 aa14.67□□□□□ -0.06
RPAIN-205ENST00000536255 GPR65Q8IYL9 337 aa14.67□□□□□ -0.06
RPAIN-205ENST00000536255 SMYD4Q8IYR2 804 aaPredicted RBP14.67□□□□□ -0.06
RPAIN-205ENST00000536255 GPT2Q8TD30 523 aa14.67□□□□□ -0.06
RPAIN-205ENST00000536255 SLC22A17Q8WUG5 538 aa14.67□□□□□ -0.06
RPAIN-205ENST00000536255 FBXL18Q96ME1 805 aa14.67□□□□□ -0.06
RPAIN-205ENST00000536255 KLHL5Q96PQ7 755 aa14.67□□□□□ -0.06
RPAIN-205ENST00000536255 TSG101Q99816 390 aa14.67□□□□□ -0.06
RPAIN-205ENST00000536255 C2CD2Q9Y426 696 aa14.67□□□□□ -0.06
RPAIN-205ENST00000536255 CITO14578 2027 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 TCF20Q9UGU0 1960 aaKnown RBP14.66□□□□□ -0.06
RPAIN-205ENST00000536255 TNFRSF10AO00220 468 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 BIN1O00499 593 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 TEX28O15482 410 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 NR3C1P04150 777 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 EPCAMP16422 314 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 HOXB8P17481 243 aaPredicted RBP14.66□□□□□ -0.06
RPAIN-205ENST00000536255 KLRC2P26717 231 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 RPL9P32969 192 aaKnown RBP14.66□□□□□ -0.06
RPAIN-205ENST00000536255 MORC3Q14149 939 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 TMEM132DQ14C87 1099 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 SNRNP35Q16560 246 aaKnown RBP14.66□□□□□ -0.06
RPAIN-205ENST00000536255 NFIL3Q16649 462 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 EDRF1Q3B7T1 1238 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 RTP2Q5QGT7 225 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 SYCE2Q6PIF2 218 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 BEST2Q8NFU1 509 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 RIN2Q8WYP3 895 aaPredicted RBP14.66□□□□□ -0.06
RPAIN-205ENST00000536255 C18orf25Q96B23 403 aaPredicted RBP14.66□□□□□ -0.06
RPAIN-205ENST00000536255 DHTKD1Q96HY7 919 aaPredicted RBP14.66□□□□□ -0.06
RPAIN-205ENST00000536255 RXFP1Q9HBX9 757 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.66□□□□□ -0.06
RPAIN-205ENST00000536255 DZANK1Q9NVP4 752 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 PRKAG3Q9UGI9 489 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 FRMD4BQ9Y2L6 1034 aa14.66□□□□□ -0.06
RPAIN-205ENST00000536255 USP15Q9Y4E8 981 aaPredicted RBP14.66□□□□□ -0.06
RPAIN-205ENST00000536255 TULP1O00294 542 aaPredicted RBP14.65□□□□□ -0.06
RPAIN-205ENST00000536255 PODXLO00592 558 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 ADH1AP07327 375 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 NR2F2P24468 414 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 IGFBP6P24592 240 aaPredicted RBP14.65□□□□□ -0.06
RPAIN-205ENST00000536255 CLCN4P51793 760 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 CREMQ03060 361 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 LRRC63Q05C16 580 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 FAM171A1Q5VUB5 890 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 ISM2Q6H9L7 571 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 JADE1Q6IE81 842 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 USP37Q86T82 979 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 CBWD2Q8IUF1 395 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 ADSSL1Q8N142 457 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 C3orf58Q8NDZ4 430 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 ZSWIM2Q8NEG5 633 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 CACTINQ8WUQ7 758 aaKnown RBP14.65□□□□□ -0.06
RPAIN-205ENST00000536255 FNBP1Q96RU3 617 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 TTPALQ9BTX7 342 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 S1PR5Q9H228 398 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 DMAC2Q9NW81 257 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 FNIP2Q9P278 1114 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 TUBGCP4Q9UGJ1 667 aa14.65□□□□□ -0.06
RPAIN-205ENST00000536255 BICDL2A1A5D9 508 aa14.64□□□□□ -0.07
RPAIN-205ENST00000536255 TRAPPC3O43617 180 aa14.64□□□□□ -0.07
RPAIN-205ENST00000536255 NFICP08651 508 aa14.64□□□□□ -0.07
RPAIN-205ENST00000536255 ZP2Q05996 745 aa14.64□□□□□ -0.07
RPAIN-205ENST00000536255 SPAG1Q07617 926 aa14.64□□□□□ -0.07
RPAIN-205ENST00000536255 ZBTB6Q15916 424 aa14.64□□□□□ -0.07
RPAIN-205ENST00000536255 ZCWPW2Q504Y3 356 aa14.64□□□□□ -0.07
RPAIN-205ENST00000536255 SPATA1Q5VX52 437 aa14.64□□□□□ -0.07
RPAIN-205ENST00000536255 CENPPQ6IPU0 288 aa14.64□□□□□ -0.07
RPAIN-205ENST00000536255 PRSS55Q6UWB4 352 aaPredicted RBP14.64□□□□□ -0.07
RPAIN-205ENST00000536255 CD300LGQ6UXG3 332 aa14.64□□□□□ -0.07
RPAIN-205ENST00000536255 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.64□□□□□ -0.07
RPAIN-205ENST00000536255 CEP57Q86XR8 500 aa14.64□□□□□ -0.07
RPAIN-205ENST00000536255 ADHFE1Q8IWW8 467 aa14.64□□□□□ -0.07
RPAIN-205ENST00000536255 RDH13Q8NBN7 331 aa14.64□□□□□ -0.07
RPAIN-205ENST00000536255 PIK3R5Q8WYR1 880 aa14.64□□□□□ -0.07
RPAIN-205ENST00000536255 SUSD6Q92537 303 aa14.64□□□□□ -0.07
RPAIN-205ENST00000536255 SYAP1Q96A49 352 aaPredicted RBP14.64□□□□□ -0.07
RPAIN-205ENST00000536255 APOL5Q9BWW9 433 aa14.64□□□□□ -0.07
RPAIN-205ENST00000536255 CETN3O15182 167 aa14.63□□□□□ -0.07
RPAIN-205ENST00000536255 MAPK13O15264 365 aa14.63□□□□□ -0.07
RPAIN-205ENST00000536255 FGFR3P22607 806 aa14.63□□□□□ -0.07
RPAIN-205ENST00000536255 PAX3P23760 479 aa14.63□□□□□ -0.07
RPAIN-205ENST00000536255 CCNE1P24864 410 aa14.63□□□□□ -0.07
RPAIN-205ENST00000536255 LRPAP1P30533 357 aa14.63□□□□□ -0.07
RPAIN-205ENST00000536255 TFAMQ00059 246 aaKnown RBP14.63□□□□□ -0.07
RPAIN-205ENST00000536255 FKBP3Q00688 224 aaKnown RBP14.63□□□□□ -0.07
RPAIN-205ENST00000536255 ITIH3Q06033 890 aa14.63□□□□□ -0.07
RPAIN-205ENST00000536255 CYP24A1Q07973 514 aa14.63□□□□□ -0.07
RPAIN-205ENST00000536255 ADAM9Q13443 819 aa14.63□□□□□ -0.07
RPAIN-205ENST00000536255 CCDC183Q5T5S1 534 aa14.63□□□□□ -0.07
RPAIN-205ENST00000536255 CEP135Q66GS9 1140 aa14.63□□□□□ -0.07
RPAIN-205ENST00000536255 PDXDC1Q6P996 788 aa14.63□□□□□ -0.07
RPAIN-205ENST00000536255 MLKLQ8NB16 471 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms