RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 B3GNT5Q9BYG0 378 aa8.13□□□□□ -1.11
CASP4-213ENST00000534356 WDCPQ9H6R7 721 aa8.13□□□□□ -1.11
CASP4-213ENST00000534356 FEZ2Q9UHY8 353 aaPredicted RBP8.13□□□□□ -1.11
CASP4-213ENST00000534356 SORCS3Q9UPU3 1222 aa8.13□□□□□ -1.11
CASP4-213ENST00000534356 PCDHA1Q9Y5I3 950 aa8.13□□□□□ -1.11
CASP4-213ENST00000534356 TARBP1Q13395 1621 aaKnown RBP8.12□□□□□ -1.11
CASP4-213ENST00000534356 HAUS5O94927 633 aa8.12□□□□□ -1.11
CASP4-213ENST00000534356 RNASE9P60153 205 aaKnown RBP8.12□□□□□ -1.11
CASP4-213ENST00000534356 TOB2Q14106 344 aaPredicted RBP8.12□□□□□ -1.11
CASP4-213ENST00000534356 DAAM2Q86T65 1068 aa8.12□□□□□ -1.11
CASP4-213ENST00000534356 PPP1R3BQ86XI6 285 aa8.12□□□□□ -1.11
CASP4-213ENST00000534356 COL23A1Q86Y22 540 aaPredicted RBP8.12□□□□□ -1.11
CASP4-213ENST00000534356 C1orf210Q8IVY1 113 aa8.12□□□□□ -1.11
CASP4-213ENST00000534356 ZFPM1Q8IX07 1006 aa8.12□□□□□ -1.11
CASP4-213ENST00000534356 TIFAQ96CG3 184 aa8.12□□□□□ -1.11
CASP4-213ENST00000534356 TMEM60Q9H2L4 133 aa8.12□□□□□ -1.11
CASP4-213ENST00000534356 MRPL46Q9H2W6 279 aaKnown RBP8.12□□□□□ -1.11
CASP4-213ENST00000534356 PRDM11Q9NQV5 511 aa8.12□□□□□ -1.11
CASP4-213ENST00000534356 AURKAIP1Q9NWT8 199 aaPredicted RBP8.12□□□□□ -1.11
CASP4-213ENST00000534356 SIDT1Q9NXL6 827 aaKnown RBP8.12□□□□□ -1.11
CASP4-213ENST00000534356 JKAMPQ9P055 326 aa8.12□□□□□ -1.11
CASP4-213ENST00000534356 EIF2B4Q9UI10 523 aaKnown RBP8.12□□□□□ -1.11
CASP4-213ENST00000534356 SLC45A2Q9UMX9 530 aa8.12□□□□□ -1.11
CASP4-213ENST00000534356 FRMPD2Q68DX3 1309 aaPredicted RBP8.11□□□□□ -1.11
CASP4-213ENST00000534356 A0A088AWK7 358 aa8.11□□□□□ -1.11
CASP4-213ENST00000534356 B8ZZF3 427 aa8.11□□□□□ -1.11
CASP4-213ENST00000534356 ZNF185O15231 689 aa8.11□□□□□ -1.11
CASP4-213ENST00000534356 AGFG1P52594 562 aaKnown RBP8.11□□□□□ -1.11
CASP4-213ENST00000534356 RAB1AP62820 205 aa8.11□□□□□ -1.11
CASP4-213ENST00000534356 GALEQ14376 348 aa8.11□□□□□ -1.11
CASP4-213ENST00000534356 ANO6Q4KMQ2 910 aa8.11□□□□□ -1.11
CASP4-213ENST00000534356 CCDC93Q567U6 631 aa8.11□□□□□ -1.11
CASP4-213ENST00000534356 UTP14CQ5TAP6 766 aaKnown RBP8.11□□□□□ -1.11
CASP4-213ENST00000534356 DGKHQ86XP1 1220 aa8.11□□□□□ -1.11
CASP4-213ENST00000534356 FITM2Q8N6M3 262 aa8.11□□□□□ -1.11
CASP4-213ENST00000534356 TBC1D15Q8TC07 691 aa8.11□□□□□ -1.11
CASP4-213ENST00000534356 NT5C1BQ96P26 610 aa8.11□□□□□ -1.11
CASP4-213ENST00000534356 SLAMF7Q9NQ25 335 aa8.11□□□□□ -1.11
CASP4-213ENST00000534356 CEP72Q9P209 647 aa8.11□□□□□ -1.11
CASP4-213ENST00000534356 STAP2Q9UGK3 403 aa8.11□□□□□ -1.11
CASP4-213ENST00000534356 PRSS29PA6NIE9 313 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 AHRRA9YTQ3 701 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 KIF3BO15066 747 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 FAM20BO75063 409 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 SCAF4O95104 1147 aaKnown RBP8.1□□□□□ -1.11
CASP4-213ENST00000534356 AHSGP02765 367 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 PIK3CGP48736 1102 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 USP14P54578 494 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 NOMO3P69849 1222 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 NRN1LQ496H8 165 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 RABL3Q5HYI8 236 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 NOMO2Q5JPE7 1267 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 AGAP9Q5VTM2 703 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 TSHZ3Q63HK5 1081 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 ZNF365Q70YC5 407 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 CHST15Q7LFX5 561 aaPredicted RBP8.1□□□□□ -1.11
CASP4-213ENST00000534356 KIAA0319LQ8IZA0 1049 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 CPT1CQ8TCG5 803 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 TNPO1Q92973 898 aaKnown RBP8.1□□□□□ -1.11
CASP4-213ENST00000534356 TEX101Q9BY14 249 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 CHST2Q9Y4C5 530 aa8.1□□□□□ -1.11
CASP4-213ENST00000534356 USP15Q9Y4E8 981 aaPredicted RBP8.1□□□□□ -1.11
CASP4-213ENST00000534356 FAM227AF5H4B4 570 aa8.09□□□□□ -1.11
CASP4-213ENST00000534356 TRIM24O15164 1050 aa8.09□□□□□ -1.11
CASP4-213ENST00000534356 AGFG2O95081 481 aa8.09□□□□□ -1.11
CASP4-213ENST00000534356 MATN4O95460 622 aa8.09□□□□□ -1.11
CASP4-213ENST00000534356 CKBP12277 381 aa8.09□□□□□ -1.11
CASP4-213ENST00000534356 GCSHP23434 173 aa8.09□□□□□ -1.11
CASP4-213ENST00000534356 PHKA1P46020 1223 aa8.09□□□□□ -1.11
CASP4-213ENST00000534356 FGL2Q14314 439 aa8.09□□□□□ -1.11
CASP4-213ENST00000534356 PDCD4Q53EL6 469 aaKnown RBP8.09□□□□□ -1.11
CASP4-213ENST00000534356 RHOT2Q8IXI1 618 aa8.09□□□□□ -1.11
CASP4-213ENST00000534356 CELF5Q8N6W0 485 aaKnown RBP8.09□□□□□ -1.11
CASP4-213ENST00000534356 MTFMTQ96DP5 389 aaKnown RBP8.09□□□□□ -1.11
CASP4-213ENST00000534356 DCLRE1CQ96SD1 692 aaKnown RBP8.09□□□□□ -1.11
CASP4-213ENST00000534356 ZNF703Q9H7S9 590 aaPredicted RBP8.09□□□□□ -1.11
CASP4-213ENST00000534356 FAM204AQ9H8W3 233 aa8.09□□□□□ -1.11
CASP4-213ENST00000534356 GNL3LQ9NVN8 582 aaKnown RBP8.09□□□□□ -1.11
CASP4-213ENST00000534356 GEMIN8Q9NWZ8 242 aaKnown RBP8.09□□□□□ -1.11
CASP4-213ENST00000534356 TRPM5Q9NZQ8 1165 aa8.09□□□□□ -1.11
CASP4-213ENST00000534356 PCDHA6Q9UN73 950 aa8.09□□□□□ -1.11
CASP4-213ENST00000534356 CCDC78A2IDD5 438 aa8.08□□□□□ -1.12
CASP4-213ENST00000534356 GNAI3P08754 354 aa8.08□□□□□ -1.12
CASP4-213ENST00000534356 GNAI1P63096 354 aa8.08□□□□□ -1.12
CASP4-213ENST00000534356 SLC25A3Q00325 362 aa8.08□□□□□ -1.12
CASP4-213ENST00000534356 SWSAP1Q6NVH7 229 aa8.08□□□□□ -1.12
CASP4-213ENST00000534356 RNF207Q6ZRF8 634 aa8.08□□□□□ -1.12
CASP4-213ENST00000534356 GDF7Q7Z4P5 450 aa8.08□□□□□ -1.12
CASP4-213ENST00000534356 OR56A1Q8NGH5 318 aa8.08□□□□□ -1.12
CASP4-213ENST00000534356 ZNF768Q9H5H4 540 aaKnown RBP8.08□□□□□ -1.12
CASP4-213ENST00000534356 BRD9Q9H8M2 597 aa8.08□□□□□ -1.12
CASP4-213ENST00000534356 KLHL11Q9NVR0 708 aa8.08□□□□□ -1.12
CASP4-213ENST00000534356 CPA4Q9UI42 421 aa8.08□□□□□ -1.12
CASP4-213ENST00000534356 L1RE1Q9UN81 338 aa8.08□□□□□ -1.12
CASP4-213ENST00000534356 DNMBPQ6XZF7 1577 aa8.08□□□□□ -1.12
CASP4-213ENST00000534356 POLA1P09884 1462 aaPredicted RBP8.07□□□□□ -1.12
CASP4-213ENST00000534356 CAPN8A6NHC0 703 aa8.07□□□□□ -1.12
CASP4-213ENST00000534356 DIRC3C9JPN6 131 aa8.07□□□□□ -1.12
CASP4-213ENST00000534356 TPP1O14773 563 aa8.07□□□□□ -1.12
CASP4-213ENST00000534356 RECQL4O94761 1208 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms