RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 ATP1A1P05023 1023 aaKnown RBP15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 RSPH10BP0C881 870 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 ZNF286BP0CG31 522 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 EEF1B2P24534 225 aaKnown RBP15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 ACADSBP45954 432 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 TEDDM1Q5T9Z0 273 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 MS4A14Q96JA4 679 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 GLIS2Q9BZE0 524 aaPredicted RBP15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 EPC1Q9H2F5 836 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 AGPAT5Q9NUQ2 364 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 PITPNM2Q9BZ72 1349 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 DEPDC5O75140 1603 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 CLCN6P51797 869 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 SNF8Q96H20 258 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 UVRAGQ9P2Y5 699 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 STAG3L1P0CL83 205 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 TBC1D1Q86TI0 1168 aaPredicted RBP15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 CHP1Q99653 195 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 MLXIPLQ9NP71 852 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 DCCP43146 1447 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 A0A0G2JND7 137 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 CCDC78A2IDD5 438 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 NFIBO00712 420 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 FGFR2P21802 821 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 RGS2P41220 211 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 KRT17Q04695 432 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 EPM2AIP1Q7L775 607 aaPredicted RBP15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 TARS2Q9BW92 718 aaKnown RBP15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 ZNF185O15231 689 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 E2F6O75461 281 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 PDIA2Q13087 525 aaKnown RBP15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 MTHFD1LQ6UB35 978 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 SLC26A7Q8TE54 656 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 MTBPQ96DY7 904 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 ASPSCR1Q9BZE9 553 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 AIPL1Q9NZN9 384 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 ATP9BO43861 1147 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 ANKS3Q6ZW76 656 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 ADSSL1Q8N142 457 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 RBBP8NLQ8NC74 664 aaPredicted RBP15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 PPHLN1Q8NEY8 458 aaKnown RBP15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 FAM118BQ9BPY3 351 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 FHOD1Q9Y613 1164 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 PYGLP06737 847 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 PDGFRAP16234 1089 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 TYK2P29597 1187 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 MAP2K2P36507 400 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 MMS22LQ6ZRQ5 1243 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 TRMT10CQ7L0Y3 403 aaKnown RBP15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 KIRREL3Q8IZU9 778 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 SCFD1Q8WVM8 642 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 GPRASP2Q96D09 838 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 L3MBTL3Q96JM7 780 aaPredicted RBP15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 LRRC37BQ96QE4 947 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 ANKEF1Q9NU02 776 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 CAPN11Q9UMQ6 739 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 SH3BP1Q9Y3L3 701 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 ASMTLO95671 621 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 HIST1H2AGP0C0S8 130 aaPredicted RBP15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 SLC9A1P19634 815 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 HIST1H2ADP20671 130 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 PNPLA4P41247 253 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 GYS2P54840 703 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 DHX34Q14147 1143 aaKnown RBP15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 PGBD3Q8N328 593 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 HIST1H2AHQ96KK5 128 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 HIST1H2AJQ99878 128 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 H2AFJQ9BTM1 129 aa15.55■□□□□ 0.08
PCDHA9-202ENST00000532602 HNRNPCL2B2RXH8 293 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 HNRNPCL1O60812 293 aaKnown RBP15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 RPLP2P05387 115 aaKnown RBP15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 PMS2P54278 862 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 NOTUMQ6P988 496 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 ERO1BQ86YB8 467 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 SLC35G2Q8TBE7 412 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 TEKT4Q8WW24 435 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 AGAP3Q96P47 875 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 STK33Q9BYT3 514 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 TRIM10Q9UDY6 481 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 NWD1Q149M9 1564 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 HLA-DRAP01903 254 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 ITGB3P05106 788 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 GOLGA7BQ2TAP0 167 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 ZBTB41Q5SVQ8 909 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 CYP4A22Q5TCH4 519 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 KDM4CQ9H3R0 1056 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 MED24O75448 989 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 MMEP08473 750 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 CLCN3P51790 818 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 LY6KQ17RY6 165 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 EDRF1Q3B7T1 1238 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 SDE2Q6IQ49 451 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 NT5C1AQ9BXI3 368 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 ZFATQ9P243 1243 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 TEKT2Q9UIF3 430 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 IGSF9BQ9UPX0 1349 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 FAM95CA0A1B0GW59 222 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 ATP6V1E1P36543 226 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 WASHC5Q12768 1159 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms