RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 LDHAL6AQ6ZMR3 332 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 SEM1Q6ZVN7 128 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 FRMD5Q7Z6J6 570 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 ADGRE4PQ86SQ3 457 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 MICU3Q86XE3 530 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 CCDC33Q8N5R6 958 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 OR14K1Q8NGZ2 314 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 CFHR4Q92496 578 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 TRIM43Q96BQ3 446 aaPredicted RBP3.63□□□□□ -1.83
CD44-234ENST00000531873 SUCLG2Q96I99 432 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 TTLL2Q9BWV7 592 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 CARD11Q9BXL7 1154 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 MAF1Q9H063 256 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 SLC6A15Q9H2J7 730 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 PRDM16Q9HAZ2 1276 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 GJB4Q9NTQ9 266 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 SAGE1Q9NXZ1 904 aa3.63□□□□□ -1.83
CD44-234ENST00000531873 AFF4Q9UHB7 1163 aaKnown RBP3.63□□□□□ -1.83
CD44-234ENST00000531873 MATN2O00339 956 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 NRP1O14786 923 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 ADAMTS3O15072 1205 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 JUNP05412 331 aaKnown RBP3.62□□□□□ -1.83
CD44-234ENST00000531873 IL1R1P14778 569 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 PI3P19957 117 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 FGFR2P21802 821 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 GRK6P43250 576 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 PHKA1P46020 1223 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 MAPK10P53779 464 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 CAP1Q01518 475 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 POU5F1BQ06416 359 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 GALNT1Q10472 559 aaPredicted RBP3.62□□□□□ -1.83
CD44-234ENST00000531873 DUSP8Q13202 625 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 NFYCQ13952 458 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 KIF22Q14807 665 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 RNF151Q2KHN1 245 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 PABPC1LQ4VXU2 614 aaKnown RBP3.62□□□□□ -1.83
CD44-234ENST00000531873 FAM47AQ5JRC9 791 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 USP30Q70CQ3 517 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 ADGRG2Q8IZP9 1017 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 CPXCR1Q8N123 301 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 KLHL36Q8N4N3 616 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 SLC35B2Q8TB61 432 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 TNPO1Q92973 898 aaKnown RBP3.62□□□□□ -1.83
CD44-234ENST00000531873 ARL8AQ96BM9 186 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 C18orf8Q96DM3 657 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 TMEM41AQ96HV5 264 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 RPL10LQ96L21 214 aaKnown RBP3.62□□□□□ -1.83
CD44-234ENST00000531873 PWWP2AQ96N64 755 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 CDC5LQ99459 802 aaKnown RBP3.62□□□□□ -1.83
CD44-234ENST00000531873 NDC1Q9BTX1 674 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 BRIP1Q9BX63 1249 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 UBA5Q9GZZ9 404 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 XYLT2Q9H1B5 865 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 CASS4Q9NQ75 786 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 JADE2Q9NQC1 790 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 CNNM1Q9NRU3 951 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 SACM1LQ9NTJ5 587 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 NTMQ9P121 344 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 MYO1AQ9UBC5 1043 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 SRRDQ9UH36 339 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 ZDHHC8Q9ULC8 765 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 GPR52Q9Y2T5 361 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 IRAK3Q9Y616 596 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 DGKBQ9Y6T7 804 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 ADAMTS20P59510 1910 aa3.62□□□□□ -1.83
CD44-234ENST00000531873 A0A1B0GTL3 188 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 TCRBV7S2A1N4TA0A589 114 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 CXorf49A8MYA2 514 aaPredicted RBP3.61□□□□□ -1.83
CD44-234ENST00000531873 BTN3A1O00481 513 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 FFAR3O14843 346 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 ARHGAP6O43182 974 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 TEX33O43247 280 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 SH3BP5O60239 455 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 TLR5O60602 858 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 TRIM13O60858 407 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 SLC43A1O75387 559 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 DNAJB5O75953 348 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 STC2O76061 302 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 RAP2AP10114 183 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 SARSP49591 514 aaKnown RBP3.61□□□□□ -1.83
CD44-234ENST00000531873 GZMKP49863 264 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 RENBPP51606 427 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 SLC13A2Q13183 592 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 STARD3Q14849 445 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 RALBP1Q15311 655 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 ZXDCQ2QGD7 858 aaPredicted RBP3.61□□□□□ -1.83
CD44-234ENST00000531873 ZMAT1Q5H9K5 638 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 TCERG1LQ5VWI1 586 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 KRT40Q6A162 431 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 MCTP2Q6DN12 878 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 CNKSR3Q6P9H4 555 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 PDZD4Q76G19 769 aaPredicted RBP3.61□□□□□ -1.83
CD44-234ENST00000531873 RALYLQ86SE5 291 aaKnown RBP3.61□□□□□ -1.83
CD44-234ENST00000531873 CMTM4Q8IZR5 234 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 ATP11CQ8NB49 1132 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 TXNDC5Q8NBS9 432 aaKnown RBP3.61□□□□□ -1.83
CD44-234ENST00000531873 IL17RDQ8NFM7 739 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 OR6B3Q8NGW1 331 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 ADAMTS17Q8TE56 1095 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 PNISRQ8TF01 805 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms