RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 CPB2Q96IY4 423 aa9.15□□□□□ -0.94
CD44-232ENST00000531118 TMEM87BQ96K49 555 aa9.15□□□□□ -0.94
CD44-232ENST00000531118 RIT2Q99578 217 aa9.15□□□□□ -0.94
CD44-232ENST00000531118 CSRNP2Q9H175 543 aa9.15□□□□□ -0.94
CD44-232ENST00000531118 MTRRQ9UBK8 725 aa9.15□□□□□ -0.94
CD44-232ENST00000531118 KLK13Q9UKR3 277 aa9.15□□□□□ -0.94
CD44-232ENST00000531118 MSRB2Q9Y3D2 182 aa9.15□□□□□ -0.94
CD44-232ENST00000531118 CCDC163A0A0D9SF12 145 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 ESYT2A0FGR8 921 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 ARHGEF37A1IGU5 675 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 SPECC1L-ADORA2AF8WAN1 911 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 EXTL3O43909 919 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 LRG1P02750 347 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 AKAP5P24588 427 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 AXLP30530 894 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 CTHP32929 405 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 MCM5P33992 734 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 OR1D2P34982 312 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 VIPR2P41587 438 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 MLLT6P55198 1093 aaPredicted RBP9.14□□□□□ -0.95
CD44-232ENST00000531118 ELAVL2Q12926 359 aaKnown RBP9.14□□□□□ -0.95
CD44-232ENST00000531118 CCINQ13939 588 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 PTPRNQ16849 979 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 PLK5Q496M5 336 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 TMEM259Q4ZIN3 620 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 PKN3Q6P5Z2 889 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 C19orf48Q6RUI8 117 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 ANO5Q75V66 913 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 RTL10Q7L3V2 364 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 HACE1Q8IYU2 909 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 TMTC2Q8N394 836 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 DEFB124Q8NES8 71 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 CSGALNACT1Q8TDX6 532 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 SLC7A3Q8WY07 619 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 SLC5A5Q92911 643 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 TMEM143Q96AN5 459 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 BBC3Q96PG8 261 aaPredicted RBP9.14□□□□□ -0.95
CD44-232ENST00000531118 CORO1BQ9BR76 489 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 LRRC2Q9BYS8 371 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 TRIM6Q9C030 488 aaPredicted RBP9.14□□□□□ -0.95
CD44-232ENST00000531118 C8orf33Q9H7E9 229 aaPredicted RBP9.14□□□□□ -0.95
CD44-232ENST00000531118 RBM28Q9NW13 759 aaKnown RBP9.14□□□□□ -0.95
CD44-232ENST00000531118 CDY1Q9Y6F8 540 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 BPTFQ12830 3046 aa9.14□□□□□ -0.95
CD44-232ENST00000531118 ASXL3Q9C0F0 2248 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 CELSR3Q9NYQ7 3312 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 MYBPHLA2RUH7 354 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 RNF223E7ERA6 249 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 NPTXRO95502 500 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 SRGAP2CP0DJJ0 459 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 KPNA1P52294 538 aaPredicted RBP9.13□□□□□ -0.95
CD44-232ENST00000531118 LAMTOR4Q0VGL1 99 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 PON2Q15165 354 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 COL28A1Q2UY09 1125 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 APOA5Q6Q788 366 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 B3GNT9Q6UX72 402 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 PDZD4Q76G19 769 aaPredicted RBP9.13□□□□□ -0.95
CD44-232ENST00000531118 RNF149Q8NC42 400 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 ADAM32Q8TC27 787 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 FAM200AQ8TCP9 573 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 PRPF31Q8WWY3 499 aaKnown RBP9.13□□□□□ -0.95
CD44-232ENST00000531118 ZC3H10Q96K80 434 aaKnown RBP9.13□□□□□ -0.95
CD44-232ENST00000531118 DHX33Q9H6R0 707 aaKnown RBP9.13□□□□□ -0.95
CD44-232ENST00000531118 TMEM9BQ9NQ34 198 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 KLK14Q9P0G3 267 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 ANKFY1Q9P2R3 1169 aa9.13□□□□□ -0.95
CD44-232ENST00000531118 PTPRDP23468 1912 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 BCLAF3A2AJT9 711 aaKnown RBP9.12□□□□□ -0.95
CD44-232ENST00000531118 HEPACAM2A8MVW5 462 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 ZNF197O14709 1029 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 MOSPD3O75425 235 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 PSMD10O75832 226 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 MICAL2O94851 1124 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 PTPN2P17706 415 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 ARF4P18085 180 aaPredicted RBP9.12□□□□□ -0.95
CD44-232ENST00000531118 FGFR3P22607 806 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 NPEPPSP55786 919 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 FGD1P98174 961 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 ROR1Q01973 937 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 CREB5Q02930 508 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 SPIRE1Q08AE8 756 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 EMC2Q15006 297 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 PCBP1Q15365 356 aaKnown RBP eCLIP9.12□□□□□ -0.95
CD44-232ENST00000531118 ELF2Q15723 593 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 RTN1Q16799 776 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 LYPD8Q6UX82 237 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 FERMT3Q86UX7 667 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 SGMS1Q86VZ5 419 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 CHD1LQ86WJ1 897 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 MFSD6LQ8IWD5 586 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 SMC5Q8IY18 1101 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 YAF2Q8IY57 180 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 SYNPOQ8N3V7 929 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 ZSCAN18Q8TBC5 510 aaPredicted RBP9.12□□□□□ -0.95
CD44-232ENST00000531118 RSPRY1Q96DX4 576 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 CCDC136Q96JN2 1154 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 ZSWIM3Q96MP5 696 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 DUSP15Q9H1R2 295 aaPredicted RBP9.12□□□□□ -0.95
CD44-232ENST00000531118 TRPV4Q9HBA0 871 aa9.12□□□□□ -0.95
CD44-232ENST00000531118 PARP2Q9UGN5 583 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms