RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 PDGFRBP09619 1106 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 RELAQ04206 551 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 DCAF17Q5H9S7 520 aaPredicted RBP14.95□□□□□ -0.02
PCF11-204ENST00000530660 CCDC62Q6P9F0 684 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 RHBDF2Q6PJF5 856 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 LVRNQ6Q4G3 990 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 RGS9BPQ6ZS82 235 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 NLRX1Q86UT6 975 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 FAM186BQ8IYM0 893 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 ZCRB1Q8TBF4 217 aaKnown RBP14.95□□□□□ -0.02
PCF11-204ENST00000530660 ARHGEF4Q9NR80 690 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 DDX25Q9UHL0 483 aaKnown RBP14.95□□□□□ -0.02
PCF11-204ENST00000530660 FBP2O00757 339 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 DNAJC6O75061 913 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 LDHAP00338 332 aaKnown RBP14.95□□□□□ -0.02
PCF11-204ENST00000530660 KRT15P19012 456 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 PEX2P28328 305 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 STT3AP46977 705 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 CLCN2P51788 898 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 COASYQ13057 564 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 NR1H3Q13133 447 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 LPIN1Q14693 890 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 HP1BP3Q5SSJ5 553 aaPredicted RBP14.95□□□□□ -0.02
PCF11-204ENST00000530660 CAPN12Q6ZSI9 719 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 HEATR3Q7Z4Q2 680 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 RBM38Q9H0Z9 239 aaKnown RBP14.95□□□□□ -0.02
PCF11-204ENST00000530660 ANKFY1Q9P2R3 1169 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 SLC7A8Q9UHI5 535 aa14.95□□□□□ -0.02
PCF11-204ENST00000530660 ERVV-2B6SEH9 535 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 E9PBE3 544 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 TRMUO75648 421 aaKnown RBP14.94□□□□□ -0.02
PCF11-204ENST00000530660 DLATP10515 647 aaKnown RBP14.94□□□□□ -0.02
PCF11-204ENST00000530660 IGBP1P78318 339 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 C6orf183Q5T699 404 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 THOC7Q6I9Y2 204 aaKnown RBP14.94□□□□□ -0.02
PCF11-204ENST00000530660 Q6ZNX1 250 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 BBS5Q8N3I7 341 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 OLIG1Q8TAK6 271 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 EURLQ9NYK6 297 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 SELENONQ9NZV5 590 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 STK24Q9Y6E0 443 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 WNK3Q9BYP7 1800 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 MYH11P35749 1972 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 GSTTP1A0A1W2PQM5 241 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 RAP1GDS1P52306 607 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 ACTR3P61158 418 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 KIF22Q14807 665 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 RBM15BQ8NDT2 890 aaKnown RBP14.94□□□□□ -0.02
PCF11-204ENST00000530660 GIPC3Q8TF64 312 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 MAML3Q96JK9 1138 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 TBCCD1Q9NVR7 557 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 NEU2Q9Y3R4 380 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 ACTL7BQ9Y614 415 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 A0A1W2PPM1 405 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 POTEMA6NI47 508 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 F8W8V4 182 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 CYP26A1O43174 497 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 ADAM23O75077 832 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 TCEA3O75764 348 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 TMEM253P0C7T8 217 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 ERLEC1Q96DZ1 483 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 LRRC27Q9C0I9 530 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 KIAA1586Q9HCI6 787 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 KIAA1522Q9P206 1035 aaPredicted RBP14.94□□□□□ -0.02
PCF11-204ENST00000530660 TSC22D4Q9Y3Q8 395 aa14.94□□□□□ -0.02
PCF11-204ENST00000530660 TRPM3Q9HCF6 1732 aaPredicted RBP14.93□□□□□ -0.02
PCF11-204ENST00000530660 NCANO14594 1321 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 TTLL13PA6NNM8 815 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 H3BSA7 217 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 ENO1P06733 434 aaKnown RBP14.93□□□□□ -0.02
PCF11-204ENST00000530660 CYP2D6P10635 497 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 ADRA1DP25100 572 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 PDE1BQ01064 536 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 ANKDD1AQ495B1 522 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 FAM26FQ5R3K3 315 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 RC3H1Q5TC82 1133 aaKnown RBP14.93□□□□□ -0.02
PCF11-204ENST00000530660 C14orf80Q86SX3 495 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 ULK2Q8IYT8 1036 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 ATG4AQ8WYN0 398 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 SNX27Q96L92 541 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 HNRNPABQ99729 332 aaKnown RBP14.93□□□□□ -0.02
PCF11-204ENST00000530660 ADAMTS6Q9UKP5 1117 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 LZTS1Q9Y250 596 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 WTIPA6NIX2 430 aaPredicted RBP14.93□□□□□ -0.02
PCF11-204ENST00000530660 LAD1O00515 517 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 PIM1P11309 404 aaPredicted RBP14.93□□□□□ -0.02
PCF11-204ENST00000530660 EEF2P13639 858 aaKnown RBP14.93□□□□□ -0.02
PCF11-204ENST00000530660 KDSRQ06136 332 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 SMUG1Q53HV7 270 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 SLC30A5Q8TAD4 765 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 CEP63Q96MT8 703 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 PPP1R10Q96QC0 940 aaKnown RBP14.93□□□□□ -0.02
PCF11-204ENST00000530660 OSBPL8Q9BZF1 889 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 NMUR2Q9GZQ4 415 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 SENP6Q9GZR1 1112 aaPredicted RBP14.93□□□□□ -0.02
PCF11-204ENST00000530660 ZNF148Q9UQR1 794 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 UBR2Q8IWV8 1755 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 PCDH11YQ9BZA8 1340 aa14.93□□□□□ -0.02
PCF11-204ENST00000530660 CIB2O75838 187 aa14.92□□□□□ -0.02
PCF11-204ENST00000530660 SIX1Q15475 284 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms