RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 PUF60Q9UHX1 559 aaKnown RBP6.13□□□□□ -1.43
RPUSD4-204ENST00000530036 SIX4Q9UIU6 781 aa6.13□□□□□ -1.43
RPUSD4-204ENST00000530036 CTNND2Q9UQB3 1225 aa6.13□□□□□ -1.43
RPUSD4-204ENST00000530036 PCDHGC5Q9Y5F6 944 aa6.13□□□□□ -1.43
RPUSD4-204ENST00000530036 C2orf16Q68DN1 1984 aa6.13□□□□□ -1.43
RPUSD4-204ENST00000530036 BICDL2A1A5D9 508 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 LRRIQ3A6PVS8 624 aaPredicted RBP6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 HIDE1A8MVS5 230 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 M0QZQ0 153 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 SYN3O14994 580 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 CETN3O15182 167 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 SLC16A3O15427 465 aaKnown RBP6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 TADA2AO75478 443 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 B3GAT3O94766 335 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 URODP06132 367 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 TMEM191BP0C7N4 346 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 DLATP10515 647 aaKnown RBP6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 FGFR3P22607 806 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 IGFBP4P22692 258 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 PAX3P23760 479 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 PSMC2P35998 433 aaKnown RBP6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 BRCC3P46736 316 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 GLUD2P49448 558 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 AP3M2P53677 418 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 NLRP12P59046 1061 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 LILRA4P59901 499 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 TFAMQ00059 246 aaKnown RBP6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 FKBP3Q00688 224 aaKnown RBP6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 BFSP1Q12934 665 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 ADAM9Q13443 819 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 KCNC3Q14003 757 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 SMC1AQ14683 1233 aaKnown RBP6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 SKOR2Q2VWA4 1001 aaPredicted RBP6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 USP41Q3LFD5 358 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 RTP2Q5QGT7 225 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 KIAA0319Q5VV43 1072 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 PLPP4Q5VZY2 271 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 CEP135Q66GS9 1140 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 LMBRD2Q68DH5 695 aaPredicted RBP6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 KLHL10Q6JEL2 608 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 C15orf39Q6ZRI6 1047 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 INTS8Q75QN2 995 aaKnown RBP6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 TMC7Q7Z402 723 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 ADGRD2Q7Z7M1 963 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 FAM186BQ8IYM0 893 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 LRRC52Q8N7C0 313 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 RDH13Q8NBN7 331 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 HASPINQ8TF76 798 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 CACTINQ8WUQ7 758 aaKnown RBP6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 NELFBQ8WX92 580 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 PIK3R5Q8WYR1 880 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 ZNF516Q92618 1163 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 ANKRD36BP1Q96IX9 119 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 SUSD3Q96L08 255 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 ZNF560Q96MR9 790 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 CEP63Q96MT8 703 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 FNBP1Q96RU3 617 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 MTMR12Q9C0I1 747 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 RXFP1Q9HBX9 757 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 NGRNQ9NPE2 291 aaKnown RBP6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 ENTPD7Q9NQZ7 604 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 DPP3Q9NY33 737 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 RWDD2AQ9UIY3 292 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 ITGA11Q9UKX5 1188 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 FRMD4BQ9Y2L6 1034 aa6.12□□□□□ -1.43
RPUSD4-204ENST00000530036 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 FSD2A1L4K1 749 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 C2orf71A6NGG8 1288 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 I3L4J1 428 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 IKBKBO14920 756 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 SPTLC1O15269 473 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 TRAPPC3O43617 180 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 TBC1D4O60343 1298 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 STAU1O95793 577 aaKnown RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 TNNC2P02585 160 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 ITGB3P05106 788 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 CYP11A1P05108 521 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 EPB41P11171 864 aaKnown RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 TNNI1P19237 187 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 ERCC5P28715 1186 aaPredicted RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 TKTP29401 623 aaKnown RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 POLR2BP30876 1174 aaKnown RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 PNPLA4P41247 253 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 TAF6P49848 677 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 MARSP56192 900 aaKnown RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 DLG4P78352 724 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 HYAL1Q12794 435 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 MRPL58Q14197 206 aaKnown RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 PSMD5Q16401 504 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 DUSP6Q16828 381 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 DUOXA2Q1HG44 320 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 CTC1Q2NKJ3 1217 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 ZACNQ401N2 412 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 TCEAL5Q5H9L2 206 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 CT47A1Q5JQC4 288 aaPredicted RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 FAM171A1Q5VUB5 890 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 SCARA3Q6AZY7 606 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 CAVIN1Q6NZI2 390 aaKnown RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 PDXDC1Q6P996 788 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms