RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 C7orf31Q8N865 590 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 DNAJB3Q8WWF6 145 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 ERO1AQ96HE7 468 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 CAPZA3Q96KX2 299 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 RPF1Q9H9Y2 349 aaKnown RBP8.26□□□□□ -1.09
SOX6-211ENST00000528429 CDHR5Q9HBB8 845 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 ETAA1Q9NY74 926 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 TAS2R14Q9NYV8 317 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 CPSF3Q9UKF6 684 aaKnown RBP8.26□□□□□ -1.09
SOX6-211ENST00000528429 UMODL1Q5DID0 1318 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 PJA2O43164 708 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 TIMM44O43615 452 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 KRT19P08727 400 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 H2AFZP0C0S5 128 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 PROZP22891 400 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 MAGEA8P43361 318 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 GSCP56915 257 aaPredicted RBP8.26□□□□□ -1.09
SOX6-211ENST00000528429 NOP14P78316 857 aaKnown RBP8.26□□□□□ -1.09
SOX6-211ENST00000528429 CLDN10P78369 228 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 SP3Q02447 781 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 ELF2Q15723 593 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 AMHR2Q16671 573 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 ERCC6LQ2NKX8 1250 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 FAM47CQ5HY64 1035 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 CXCL17Q6UXB2 119 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 H2AFVQ71UI9 128 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 CATSPER4Q7RTX7 472 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 FAM71AQ8IYT1 594 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 RPUSD2Q8IZ73 545 aaKnown RBP8.26□□□□□ -1.09
SOX6-211ENST00000528429 TMEM130Q8N3G9 435 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 SHC3Q92529 594 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 AGPAT1Q99943 283 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 NFKBIZQ9BYH8 718 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 GOLPH3Q9H4A6 298 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 PDZD7Q9H5P4 517 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 PTPRHQ9HD43 1115 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 CDC23Q9UJX2 597 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 ITM2BQ9Y287 266 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 COMMD10Q9Y6G5 202 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 ZNF236Q9UL36 1845 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 NCK2O43639 380 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 TSPAN1O60635 241 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 DUSP11O75319 330 aaKnown RBP8.26□□□□□ -1.09
SOX6-211ENST00000528429 FTCDO95954 541 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 CST3P01034 146 aaPredicted RBP8.26□□□□□ -1.09
SOX6-211ENST00000528429 STAG3L1P0CL83 205 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 MYBL2P10244 700 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 CYBAP13498 195 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 PDE6CP51160 858 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 GALCP54803 685 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 HTRA3P83110 453 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 PURAQ00577 322 aaKnown RBP8.26□□□□□ -1.09
SOX6-211ENST00000528429 NCBP1Q09161 790 aaKnown RBP8.26□□□□□ -1.09
SOX6-211ENST00000528429 TRPC3Q13507 836 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 DUOXA2Q1HG44 320 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 TEX35Q5T0J7 233 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 TRAPPC11Q7Z392 1133 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 CCDC91Q7Z6B0 441 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 NOP9Q86U38 636 aaKnown RBP8.26□□□□□ -1.09
SOX6-211ENST00000528429 MYLK4Q86YV6 388 aaPredicted RBP8.26□□□□□ -1.09
SOX6-211ENST00000528429 WDR49Q8IV35 697 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 EPS8L1Q8TE68 723 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 ADPGKQ9BRR6 497 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 GCOM2Q9BZD3 368 aaPredicted RBP8.26□□□□□ -1.09
SOX6-211ENST00000528429 APOBEC3GQ9HC16 384 aaKnown RBP8.26□□□□□ -1.09
SOX6-211ENST00000528429 MKS1Q9NXB0 559 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 DAAM1Q9Y4D1 1078 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 SAR1BQ9Y6B6 198 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 KAT6AQ92794 2004 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 PALMO75781 387 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 MMEP08473 750 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 RARBP10826 455 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 CD58P19256 250 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 CXCR5P32302 372 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 MYL6P60660 151 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 PSMC1P62191 440 aaKnown RBP8.25□□□□□ -1.09
SOX6-211ENST00000528429 GCNT1Q02742 428 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 POU5F1BQ06416 359 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 TERF2Q15554 542 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 ZNF394Q53GI3 561 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 C10orf76Q5T2E6 689 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 SCARA5Q6ZMJ2 495 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 ZNF410Q86VK4 478 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 EFCAB13Q8IY85 973 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 CTNNBL1Q8WYA6 563 aaPredicted RBP8.25□□□□□ -1.09
SOX6-211ENST00000528429 UBXN4Q92575 508 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 KATNAL1Q9BW62 490 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 SPC25Q9HBM1 224 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 RNF186Q9NXI6 227 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 PACSIN2Q9UNF0 486 aaPredicted RBP8.25□□□□□ -1.09
SOX6-211ENST00000528429 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.25□□□□□ -1.09
SOX6-211ENST00000528429 JRKLQ9Y4A0 524 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 C17orf102A2RUQ5 167 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 ZNF185O15231 689 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 ZC3H11AO75152 810 aaKnown RBP eCLIP8.25□□□□□ -1.09
SOX6-211ENST00000528429 TNNC2P02585 160 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 NFICP08651 508 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 CLTAP09496 248 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 SETSIPP0DME0 302 aa8.25□□□□□ -1.09
SOX6-211ENST00000528429 PRKAR2AP13861 404 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms