RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 NCR1O76036 304 aa7.36□□□□□ -1.23
PCF11-202ENST00000528336 UBXN7O94888 489 aa7.36□□□□□ -1.23
PCF11-202ENST00000528336 CKBP12277 381 aa7.36□□□□□ -1.23
PCF11-202ENST00000528336 NOMO3P69849 1222 aa7.36□□□□□ -1.23
PCF11-202ENST00000528336 NOMO2Q5JPE7 1267 aa7.36□□□□□ -1.23
PCF11-202ENST00000528336 ZFPM1Q8IX07 1006 aa7.36□□□□□ -1.23
PCF11-202ENST00000528336 RHOT2Q8IXI1 618 aa7.36□□□□□ -1.23
PCF11-202ENST00000528336 KLHDC4Q8TBB5 520 aa7.36□□□□□ -1.23
PCF11-202ENST00000528336 CDK5RAP3Q96JB5 506 aa7.36□□□□□ -1.23
PCF11-202ENST00000528336 ZSWIM1Q9BR11 485 aa7.36□□□□□ -1.23
PCF11-202ENST00000528336 ZNF747Q9BV97 191 aa7.36□□□□□ -1.23
PCF11-202ENST00000528336 KLHL11Q9NVR0 708 aa7.36□□□□□ -1.23
PCF11-202ENST00000528336 PNPOQ9NVS9 261 aa7.36□□□□□ -1.23
PCF11-202ENST00000528336 JKAMPQ9P055 326 aa7.36□□□□□ -1.23
PCF11-202ENST00000528336 FEZ2Q9UHY8 353 aaPredicted RBP7.36□□□□□ -1.23
PCF11-202ENST00000528336 STXBP5LQ9Y2K9 1186 aa7.36□□□□□ -1.23
PCF11-202ENST00000528336 CHST2Q9Y4C5 530 aa7.36□□□□□ -1.23
PCF11-202ENST00000528336 AATKQ6ZMQ8 1374 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 GOLGA6CA6NDK9 693 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 GOLGA6BA6NDN3 693 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 DIRC3C9JPN6 131 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 RNASET2O00584 256 aaKnown RBP7.35□□□□□ -1.23
PCF11-202ENST00000528336 MATN3O15232 486 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 SPATA31D3P0C874 917 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 GOLGA6DP0CG33 693 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 TYRP14679 529 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 ATF3P18847 181 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 HTR1BP28222 390 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 PRDX5P30044 214 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 CCDC93Q567U6 631 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 SPATA31D4Q6ZUB0 917 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 SLC25A43Q8WUT9 341 aaPredicted RBP7.35□□□□□ -1.23
PCF11-202ENST00000528336 TNPO1Q92973 898 aaKnown RBP7.35□□□□□ -1.23
PCF11-202ENST00000528336 NRDE2Q9H7Z3 1164 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 AKIP1Q9NQ31 210 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 GOLGA6AQ9NYA3 693 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 MAP3K2Q9Y2U5 619 aa7.35□□□□□ -1.23
PCF11-202ENST00000528336 A0A1B0GTW7 788 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 CCDC78A2IDD5 438 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 VSTM5A8MXK1 200 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 H3BML4 177 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 NDUFA10O95299 355 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 GNAI3P08754 354 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 NR4A1P22736 598 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 GCSHP23434 173 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 PSMC1P62191 440 aaKnown RBP7.34□□□□□ -1.23
PCF11-202ENST00000528336 GNAI1P63096 354 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 TUBA3CQ13748 450 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 PLS1Q14651 629 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 MIIPQ5JXC2 388 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 TUBA3EQ6PEY2 450 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 ZNF365Q70YC5 407 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 SLC17A8Q8NDX2 589 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 PLBD2Q8NHP8 589 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 TTC8Q8TAM2 541 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 RUNDC1Q96C34 613 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 SLC35A4Q96G79 324 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 SLC46A2Q9BY10 475 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 WDCPQ9H6R7 721 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 BRD9Q9H8M2 597 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 GNL3LQ9NVN8 582 aaKnown RBP7.34□□□□□ -1.23
PCF11-202ENST00000528336 USP25Q9UHP3 1055 aa7.34□□□□□ -1.23
PCF11-202ENST00000528336 NPIPB8E9PQR5 432 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 AHSGP02765 367 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 GJB1P08034 283 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 FTH1P19P0C7X4 201 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 PIK3CGP48736 1102 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 NKX6-1P78426 367 aaPredicted RBP7.33□□□□□ -1.24
PCF11-202ENST00000528336 HSD11B2P80365 405 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 DAAM2Q86T65 1068 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 PPP1R3BQ86XI6 285 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 FAM90A1Q86YD7 464 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 MAPKAPK5Q8IW41 473 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 AOPEPQ8N6M6 819 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 NUP133Q8WUM0 1156 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 FAM167AQ96KS9 214 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 LRFN3Q9BTN0 628 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 IMPG2Q9BZV3 1241 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 MRPL46Q9H2W6 279 aaKnown RBP7.33□□□□□ -1.24
PCF11-202ENST00000528336 SIDT1Q9NXL6 827 aaKnown RBP7.33□□□□□ -1.24
PCF11-202ENST00000528336 GABBR1Q9UBS5 961 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 STAP2Q9UGK3 403 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 CPA4Q9UI42 421 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 PCDHA6Q9UN73 950 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 FPGT-TNNI3KV9GXZ4 949 aa7.33□□□□□ -1.24
PCF11-202ENST00000528336 B3GALT2O43825 422 aa7.32□□□□□ -1.24
PCF11-202ENST00000528336 FCER1AP12319 257 aa7.32□□□□□ -1.24
PCF11-202ENST00000528336 TNFRSF1AP19438 455 aa7.32□□□□□ -1.24
PCF11-202ENST00000528336 FGFR4P22455 802 aa7.32□□□□□ -1.24
PCF11-202ENST00000528336 ZFP36P26651 326 aaKnown RBP7.32□□□□□ -1.24
PCF11-202ENST00000528336 SLFN5Q08AF3 891 aa7.32□□□□□ -1.24
PCF11-202ENST00000528336 LLGL1Q15334 1064 aa7.32□□□□□ -1.24
PCF11-202ENST00000528336 GFOD2Q3B7J2 385 aa7.32□□□□□ -1.24
PCF11-202ENST00000528336 FOXR2Q6PJQ5 311 aa7.32□□□□□ -1.24
PCF11-202ENST00000528336 DBX2Q6ZNG2 339 aa7.32□□□□□ -1.24
PCF11-202ENST00000528336 OVCH2Q7RTZ1 564 aa7.32□□□□□ -1.24
PCF11-202ENST00000528336 TMIEQ8NEW7 156 aa7.32□□□□□ -1.24
PCF11-202ENST00000528336 MTFMTQ96DP5 389 aaKnown RBP7.32□□□□□ -1.24
PCF11-202ENST00000528336 KLHL32Q96NJ5 620 aa7.32□□□□□ -1.24
PCF11-202ENST00000528336 TLR10Q9BXR5 811 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms