RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 PGS1Q32NB8 556 aa6.09□□□□□ -1.43
CD44-223ENST00000526553 SPDYE7PQ495Y7 208 aa6.09□□□□□ -1.43
CD44-223ENST00000526553 NOMO2Q5JPE7 1267 aa6.09□□□□□ -1.43
CD44-223ENST00000526553 B3GNTL1Q67FW5 361 aaPredicted RBP6.09□□□□□ -1.43
CD44-223ENST00000526553 Q6ZPA2 131 aa6.09□□□□□ -1.43
CD44-223ENST00000526553 LDLRAD3Q86YD5 345 aa6.09□□□□□ -1.43
CD44-223ENST00000526553 FAM43AQ8N2R8 423 aa6.09□□□□□ -1.43
CD44-223ENST00000526553 FUBP1Q96AE4 644 aaKnown RBP6.09□□□□□ -1.43
CD44-223ENST00000526553 MVB12AQ96EY5 273 aa6.09□□□□□ -1.43
CD44-223ENST00000526553 BOD1Q96IK1 185 aa6.09□□□□□ -1.43
CD44-223ENST00000526553 MED15Q96RN5 788 aa6.09□□□□□ -1.43
CD44-223ENST00000526553 RTFDC1Q9BY42 306 aaPredicted RBP6.09□□□□□ -1.43
CD44-223ENST00000526553 TMEM74BQ9NUR3 256 aa6.09□□□□□ -1.43
CD44-223ENST00000526553 RNF181Q9P0P0 153 aa6.09□□□□□ -1.43
CD44-223ENST00000526553 ZNF180Q9UJW8 692 aa6.09□□□□□ -1.43
CD44-223ENST00000526553 MAP3K2Q9Y2U5 619 aa6.09□□□□□ -1.43
CD44-223ENST00000526553 CCDC78A2IDD5 438 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 TMEM191CA6NGB0 347 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 F2RL2O00254 374 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 RFPL1O75677 317 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 GPANK1O95872 356 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 ANXA1P04083 346 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 FCER1AP12319 257 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 CYP2C19P33261 490 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 INHBCP55103 352 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 CXADRP78310 365 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 HSD11B2P80365 405 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 DPTQ07507 201 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 NOGQ13253 232 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 FLYWCH1Q4VC44 716 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 ATAT1Q5SQI0 421 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 FOXR2Q6PJQ5 311 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 AOPEPQ8N6M6 819 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 HPS3Q969F9 1004 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 MARS2Q96GW9 593 aaKnown RBP6.08□□□□□ -1.44
CD44-223ENST00000526553 AIFM3Q96NN9 605 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 SERHL2Q9H4I8 314 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 KMT5AQ9NQR1 393 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 GNL3LQ9NVN8 582 aaKnown RBP6.08□□□□□ -1.44
CD44-223ENST00000526553 RLIMQ9NVW2 624 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 THRAP3Q9Y2W1 955 aaKnown RBP6.08□□□□□ -1.44
CD44-223ENST00000526553 NOX1Q9Y5S8 564 aa6.08□□□□□ -1.44
CD44-223ENST00000526553 AATKQ6ZMQ8 1374 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 LRRC14BA6NHZ5 514 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 OFD1O75665 1012 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 AGFG2O95081 481 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 SPDEFO95238 335 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 FOSP01100 380 aaPredicted RBP6.07□□□□□ -1.44
CD44-223ENST00000526553 FTLP02792 175 aaPredicted RBP6.07□□□□□ -1.44
CD44-223ENST00000526553 S100BP04271 92 aaPredicted RBP6.07□□□□□ -1.44
CD44-223ENST00000526553 KRT4P19013 534 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 SMARCA1P28370 1054 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 BLOC1S1P78537 153 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 TAP1Q03518 808 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 UTP14CQ5TAP6 766 aaKnown RBP6.07□□□□□ -1.44
CD44-223ENST00000526553 JPH3Q8WXH2 748 aaPredicted RBP6.07□□□□□ -1.44
CD44-223ENST00000526553 FAM167AQ96KS9 214 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 MAP3K14Q99558 947 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 ALOXE3Q9BYJ1 711 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 SLC12A5Q9H2X9 1139 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 WDCPQ9H6R7 721 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 ANKFY1Q9P2R3 1169 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 HSFX1Q9UBD0 423 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 USP25Q9UHP3 1055 aa6.07□□□□□ -1.44
CD44-223ENST00000526553 PIPSLA2A3N6 862 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 GRID2IPA4D2P6 1211 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 UNC119BA6NIH7 251 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 B3GALT2O43825 422 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 PRDX5P30044 214 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 ZEB1P37275 1124 aaPredicted RBP6.06□□□□□ -1.44
CD44-223ENST00000526553 IL12RB1P42701 662 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 MAP2K6P52564 334 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 TGFB2P61812 414 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 TP53BP2Q13625 1128 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 CCDC93Q567U6 631 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 IFIT1BQ5T764 474 aaKnown RBP6.06□□□□□ -1.44
CD44-223ENST00000526553 ABHD17BQ5VST6 288 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 MRGPRGQ86SM5 289 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 FAM90A1Q86YD7 464 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 PDSS2Q86YH6 399 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 RNF31Q96EP0 1072 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 KLHL32Q96NJ5 620 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 MRIQ9BWK5 157 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 WDR11Q9BZH6 1224 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 GALNT9Q9HCQ5 603 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 NMRK2Q9NPI5 230 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 ZIM2Q9NZV7 527 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 FEZ2Q9UHY8 353 aaPredicted RBP6.06□□□□□ -1.44
CD44-223ENST00000526553 PCDHA3Q9Y5H8 950 aa6.06□□□□□ -1.44
CD44-223ENST00000526553 MYADML2A6NDP7 307 aa6.05□□□□□ -1.44
CD44-223ENST00000526553 FOXN1O15353 648 aa6.05□□□□□ -1.44
CD44-223ENST00000526553 GNAI3P08754 354 aa6.05□□□□□ -1.44
CD44-223ENST00000526553 HMGA2P52926 109 aa6.05□□□□□ -1.44
CD44-223ENST00000526553 GNAI1P63096 354 aa6.05□□□□□ -1.44
CD44-223ENST00000526553 PURAQ00577 322 aaKnown RBP6.05□□□□□ -1.44
CD44-223ENST00000526553 SCAPQ12770 1279 aa6.05□□□□□ -1.44
CD44-223ENST00000526553 CYP2A13Q16696 494 aa6.05□□□□□ -1.44
CD44-223ENST00000526553 Q6YL49 198 aa6.05□□□□□ -1.44
CD44-223ENST00000526553 HEATR3Q7Z4Q2 680 aa6.05□□□□□ -1.44
CD44-223ENST00000526553 ASB10Q8WXI3 467 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms