RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 CPB1P15086 417 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 FCARP24071 287 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 RPA1P27694 616 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 MCM4P33991 863 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 GRM5P41594 1212 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 NPTX2P47972 431 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 CXCL12P48061 93 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 PXNP49023 591 aaPredicted RBP7.2□□□□□ -1.26
CD44-221ENST00000526000 KPNA1P52294 538 aaPredicted RBP7.2□□□□□ -1.26
CD44-221ENST00000526000 C1QBPQ07021 282 aaKnown RBP7.2□□□□□ -1.26
CD44-221ENST00000526000 ST3GAL1Q11201 340 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 GNL2Q13823 731 aaKnown RBP7.2□□□□□ -1.26
CD44-221ENST00000526000 SIM2Q14190 667 aaPredicted RBP7.2□□□□□ -1.26
CD44-221ENST00000526000 GAS6Q14393 721 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 ANKRD1Q15327 319 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 ZNF528Q3MIS6 628 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 PRSS36Q5K4E3 855 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 TTC38Q5R3I4 469 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 STXBP5Q5T5C0 1151 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 ALKAL1Q6UXT8 129 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 TAS1R3Q7RTX0 852 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 YAF2Q8IY57 180 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 ZSCAN18Q8TBC5 510 aaPredicted RBP7.2□□□□□ -1.26
CD44-221ENST00000526000 ELSPBP1Q96BH3 223 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 RSPRY1Q96DX4 576 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 FAM212AQ96EL1 285 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 ZFYVE19Q96K21 471 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 C8orf76Q96K31 380 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 TBC1D32Q96NH3 1257 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 ASB16Q96NS5 453 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 RUSC1Q9BVN2 902 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 KMT5AQ9NQR1 393 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 C2orf42Q9NWW7 574 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 LRWD1Q9UFC0 647 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 TUBGCP4Q9UGJ1 667 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 INSL5Q9Y5Q6 135 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 F5P12259 2224 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 NPHP3-ACAD11A0A0J9YXS1 232 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 A0A1W2PRU2 124 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 TMEM189-UBE2V1I3L0A0 370 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 MAN2B1O00754 1011 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 TBC1D4O60343 1298 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 LILRB5O75023 590 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 CHRNB1P11230 501 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 ATF2P15336 505 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 PSMC3P17980 439 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 RBM25P49756 843 aaKnown RBP7.19□□□□□ -1.26
CD44-221ENST00000526000 EFNA5P52803 228 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 DUSP4Q13115 394 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 MRPL58Q14197 206 aaKnown RBP7.19□□□□□ -1.26
CD44-221ENST00000526000 SLC10A6Q3KNW5 377 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 SLC8B1Q6J4K2 584 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 DSTYKQ6XUX3 929 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 Q6ZS52 159 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 CEP68Q76N32 757 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 KCNK18Q7Z418 384 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 APBB1IPQ7Z5R6 666 aaPredicted RBP7.19□□□□□ -1.26
CD44-221ENST00000526000 TCEAL8Q8IYN2 117 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 DAW1Q8N136 415 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 ELMOD1Q8N336 334 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 C4orf32Q8N8J7 132 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 ATAD1Q8NBU5 361 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 SHKBP1Q8TBC3 707 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 CSGALNACT1Q8TDX6 532 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 SNX29Q8TEQ0 813 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 DDX12PQ92771 950 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 KIFAP3Q92845 792 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 SMARCD2Q92925 531 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 IRF7Q92985 503 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 UROC1Q96N76 676 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 LRRC3BQ96PB8 259 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 TMEM209Q96SK2 561 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 MRPL4Q9BYD3 311 aaKnown RBP7.19□□□□□ -1.26
CD44-221ENST00000526000 EPC1Q9H2F5 836 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 CHRDQ9H2X0 955 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 TOPORSQ9NS56 1045 aaPredicted RBP7.19□□□□□ -1.26
CD44-221ENST00000526000 POLR3BQ9NW08 1133 aaPredicted RBP7.19□□□□□ -1.26
CD44-221ENST00000526000 ANKFY1Q9P2R3 1169 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 RALYQ9UKM9 306 aaKnown RBP7.19□□□□□ -1.26
CD44-221ENST00000526000 NCANO14594 1321 aa7.19□□□□□ -1.26
CD44-221ENST00000526000 PRR5-ARHGAP8B1AHC4 643 aa7.18□□□□□ -1.26
CD44-221ENST00000526000 DPYSL4O14531 572 aa7.18□□□□□ -1.26
CD44-221ENST00000526000 PPEF2O14830 753 aa7.18□□□□□ -1.26
CD44-221ENST00000526000 SYN3O14994 580 aa7.18□□□□□ -1.26
CD44-221ENST00000526000 SEC24BO95487 1268 aa7.18□□□□□ -1.26
CD44-221ENST00000526000 VNN2O95498 520 aa7.18□□□□□ -1.26
CD44-221ENST00000526000 RPL9P32969 192 aaKnown RBP7.18□□□□□ -1.26
CD44-221ENST00000526000 RPS9P46781 194 aaKnown RBP7.18□□□□□ -1.26
CD44-221ENST00000526000 ARHGAP8P85298 464 aa7.18□□□□□ -1.26
CD44-221ENST00000526000 LMNB2Q03252 620 aa7.18□□□□□ -1.26
CD44-221ENST00000526000 TNK2Q07912 1038 aa7.18□□□□□ -1.26
CD44-221ENST00000526000 PTGDRQ13258 359 aa7.18□□□□□ -1.26
CD44-221ENST00000526000 DMP1Q13316 513 aaPredicted RBP7.18□□□□□ -1.26
CD44-221ENST00000526000 DHX8Q14562 1220 aaKnown RBP7.18□□□□□ -1.26
CD44-221ENST00000526000 PON2Q15165 354 aa7.18□□□□□ -1.26
CD44-221ENST00000526000 IL17AQ16552 155 aa7.18□□□□□ -1.26
CD44-221ENST00000526000 XKR4Q5GH76 650 aa7.18□□□□□ -1.26
CD44-221ENST00000526000 PPM1JQ5JR12 505 aa7.18□□□□□ -1.26
CD44-221ENST00000526000 WDR44Q5JSH3 913 aa7.18□□□□□ -1.26
CD44-221ENST00000526000 ZNF280DQ6N043 979 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms