RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 SGCZQ96LD1 299 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 MYOCQ99972 504 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 LRRC27Q9C0I9 530 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 C12orf65Q9H3J6 166 aaKnown RBP7.18□□□□□ -1.26
SKP1-213ENST00000524288 NELFAQ9H3P2 528 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 CALCOCO1Q9P1Z2 691 aa7.18□□□□□ -1.26
SKP1-213ENST00000524288 NT5C1B-RDH14C9J2C7 533 aa7.17□□□□□ -1.26
SKP1-213ENST00000524288 RASA4BC9J798 803 aa7.17□□□□□ -1.26
SKP1-213ENST00000524288 F5H423 210 aaPredicted RBP7.17□□□□□ -1.26
SKP1-213ENST00000524288 F2RL2O00254 374 aa7.17□□□□□ -1.26
SKP1-213ENST00000524288 RASA4O43374 803 aa7.17□□□□□ -1.26
SKP1-213ENST00000524288 NCK2O43639 380 aa7.17□□□□□ -1.26
SKP1-213ENST00000524288 CREB3O43889 395 aa7.17□□□□□ -1.26
SKP1-213ENST00000524288 SBK3P0C264 359 aa7.17□□□□□ -1.26
SKP1-213ENST00000524288 VSIG10L2P0DP72 767 aa7.17□□□□□ -1.26
SKP1-213ENST00000524288 BRAFP15056 766 aa7.17□□□□□ -1.26
SKP1-213ENST00000524288 FAM83BQ5T0W9 1011 aa7.17□□□□□ -1.26
SKP1-213ENST00000524288 GJC2Q5T442 439 aaPredicted RBP7.17□□□□□ -1.26
SKP1-213ENST00000524288 AFMIDQ63HM1 303 aa7.17□□□□□ -1.26
SKP1-213ENST00000524288 RNF207Q6ZRF8 634 aa7.17□□□□□ -1.26
SKP1-213ENST00000524288 TNPO1Q92973 898 aaKnown RBP7.17□□□□□ -1.26
SKP1-213ENST00000524288 P2RX7Q99572 595 aaKnown RBP7.17□□□□□ -1.26
SKP1-213ENST00000524288 PLA2G12BQ9BX93 195 aa7.17□□□□□ -1.26
SKP1-213ENST00000524288 KIAA1586Q9HCI6 787 aa7.17□□□□□ -1.26
SKP1-213ENST00000524288 SARS2Q9NP81 518 aaKnown RBP7.17□□□□□ -1.26
SKP1-213ENST00000524288 CPNE7Q9UBL6 633 aa7.17□□□□□ -1.26
SKP1-213ENST00000524288 OGDHLQ9ULD0 1010 aa7.17□□□□□ -1.26
SKP1-213ENST00000524288 ARIH2O95376 493 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 SETSIPP0DME0 302 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 ACO1P21399 889 aaKnown RBP7.16□□□□□ -1.26
SKP1-213ENST00000524288 TNFSF4P23510 183 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 PRDX5P30044 214 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 ADCY7P51828 1080 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 CASP5P51878 434 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 CTXN1P60606 82 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 ADAM8P78325 824 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 EXOSC9Q06265 439 aaKnown RBP7.16□□□□□ -1.26
SKP1-213ENST00000524288 MIIPQ5JXC2 388 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 MFSD14BQ5SR56 506 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 ERAP2Q6P179 960 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 MAMDC4Q6UXC1 1216 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 PCSK9Q8NBP7 692 aaKnown RBP7.16□□□□□ -1.26
SKP1-213ENST00000524288 BRIX1Q8TDN6 353 aaKnown RBP7.16□□□□□ -1.26
SKP1-213ENST00000524288 POF1BQ8WVV4 589 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 ANKS1AQ92625 1134 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 LPPQ93052 612 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 PHKBQ93100 1093 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 KIAA1191Q96A73 305 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 FAM167AQ96KS9 214 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 OR14A2Q96R54 314 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 GPHA2Q96T91 129 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 SCAND2PQ9GZW5 306 aaPredicted RBP7.16□□□□□ -1.26
SKP1-213ENST00000524288 SLC6A15Q9H2J7 730 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 CNNM1Q9NRU3 951 aa7.16□□□□□ -1.26
SKP1-213ENST00000524288 ABHD14A-ACY1A0A1B0GW23 586 aa7.15□□□□□ -1.26
SKP1-213ENST00000524288 TBX3O15119 743 aa7.15□□□□□ -1.26
SKP1-213ENST00000524288 GASTP01350 101 aa7.15□□□□□ -1.26
SKP1-213ENST00000524288 JUNP05412 331 aaKnown RBP7.15□□□□□ -1.26
SKP1-213ENST00000524288 HDCP19113 662 aa7.15□□□□□ -1.26
SKP1-213ENST00000524288 SUMO3P55854 103 aaPredicted RBP7.15□□□□□ -1.26
SKP1-213ENST00000524288 APBA1Q02410 837 aa7.15□□□□□ -1.26
SKP1-213ENST00000524288 FOXE3Q13461 319 aa7.15□□□□□ -1.26
SKP1-213ENST00000524288 ANO1Q5XXA6 986 aa7.15□□□□□ -1.26
SKP1-213ENST00000524288 Q6ZSN1 163 aa7.15□□□□□ -1.26
SKP1-213ENST00000524288 ZNF572Q7Z3I7 529 aaPredicted RBP7.15□□□□□ -1.26
SKP1-213ENST00000524288 OR2C3Q8N628 320 aa7.15□□□□□ -1.26
SKP1-213ENST00000524288 ENAHQ8N8S7 591 aaPredicted RBP7.15□□□□□ -1.26
SKP1-213ENST00000524288 MRPL46Q9H2W6 279 aaKnown RBP7.15□□□□□ -1.26
SKP1-213ENST00000524288 WDCPQ9H6R7 721 aa7.15□□□□□ -1.26
SKP1-213ENST00000524288 ZNF287Q9HBT7 754 aa7.15□□□□□ -1.26
SKP1-213ENST00000524288 GPRC5BQ9NZH0 403 aa7.15□□□□□ -1.26
SKP1-213ENST00000524288 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.15□□□□□ -1.26
SKP1-213ENST00000524288 CDC23Q9UJX2 597 aa7.15□□□□□ -1.26
SKP1-213ENST00000524288 POM121BA6NF01 834 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 F8W8V4 182 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 KIAA0391O15091 583 aaKnown RBP7.14□□□□□ -1.27
SKP1-213ENST00000524288 GRM6O15303 877 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 MTSS1O43312 755 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 SLC26A4O43511 780 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 TCEA3O75764 348 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 STC2O76061 302 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 IL2RBP14784 551 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 ALOX15P16050 662 aaPredicted RBP7.14□□□□□ -1.27
SKP1-213ENST00000524288 ABCB4P21439 1286 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 SOX8P57073 446 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 CREMQ03060 361 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 HGFACQ04756 655 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 FAM214AQ32MH5 1076 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 SESTD1Q86VW0 696 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 CMTM4Q8IZR5 234 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 CCDC33Q8N5R6 958 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 MRGPRX1Q96LB2 322 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 BTBD1Q9H0C5 482 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 C11orf54Q9H0W9 315 aaPredicted RBP7.14□□□□□ -1.27
SKP1-213ENST00000524288 EPC1Q9H2F5 836 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 CERS4Q9HA82 394 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 STK32BQ9NY57 414 aa7.14□□□□□ -1.27
SKP1-213ENST00000524288 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.14□□□□□ -1.27
SKP1-213ENST00000524288 ATRNL1Q5VV63 1379 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 TCRBV7S2A1N4TA0A589 114 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms