RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 PHACTR3Q96KR7 559 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 PACSIN1Q9BY11 444 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 GSTO2Q9H4Y5 243 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 WDCPQ9H6R7 721 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 GOLGA6AQ9NYA3 693 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 MYRFQ9Y2G1 1151 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 STXBP5LQ9Y2K9 1186 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 CHST2Q9Y4C5 530 aa7.55□□□□□ -1.2
CPNE3-206ENST00000523469 F2RL2O00254 374 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 ERC2O15083 957 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 ITGB1P05556 798 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 SLC6A2P23975 617 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 RNASE9P60153 205 aaKnown RBP7.54□□□□□ -1.2
CPNE3-206ENST00000523469 FLYWCH1Q4VC44 716 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 CCDC157Q569K6 752 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 LCE1DQ5T752 114 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 AGAP9Q5VTM2 703 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 GDF7Q7Z4P5 450 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 RUNDC1Q96C34 613 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 PLEKHG4BQ96PX9 1271 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 CGRRF1Q99675 332 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 ACO2Q99798 780 aaKnown RBP7.54□□□□□ -1.2
CPNE3-206ENST00000523469 LMBRD1Q9NUN5 540 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 GNL3LQ9NVN8 582 aaKnown RBP7.54□□□□□ -1.2
CPNE3-206ENST00000523469 TRPM5Q9NZQ8 1165 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 JKAMPQ9P055 326 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 CHPF2Q9P2E5 772 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 NR2E3Q9Y5X4 410 aa7.54□□□□□ -1.2
CPNE3-206ENST00000523469 KIF21BO75037 1637 aa7.53□□□□□ -1.2
CPNE3-206ENST00000523469 AHRRA9YTQ3 701 aa7.53□□□□□ -1.2
CPNE3-206ENST00000523469 CTNND1O60716 968 aaKnown RBP7.53□□□□□ -1.2
CPNE3-206ENST00000523469 FAM20BO75063 409 aa7.53□□□□□ -1.2
CPNE3-206ENST00000523469 SLC43A1O75387 559 aa7.53□□□□□ -1.2
CPNE3-206ENST00000523469 PEX11BO96011 259 aa7.53□□□□□ -1.2
CPNE3-206ENST00000523469 C1SP09871 688 aa7.53□□□□□ -1.2
CPNE3-206ENST00000523469 SPATA31D3P0C874 917 aa7.53□□□□□ -1.2
CPNE3-206ENST00000523469 GCSHP23434 173 aa7.53□□□□□ -1.2
CPNE3-206ENST00000523469 SLC6A4P31645 630 aa7.53□□□□□ -1.2
CPNE3-206ENST00000523469 FOXE3Q13461 319 aa7.53□□□□□ -1.2
CPNE3-206ENST00000523469 SPATA31D4Q6ZUB0 917 aa7.53□□□□□ -1.2
CPNE3-206ENST00000523469 WDR75Q8IWA0 830 aaKnown RBP7.53□□□□□ -1.2
CPNE3-206ENST00000523469 CACTINQ8WUQ7 758 aaKnown RBP7.53□□□□□ -1.2
CPNE3-206ENST00000523469 NEU1Q99519 415 aa7.53□□□□□ -1.2
CPNE3-206ENST00000523469 SLC46A2Q9BY10 475 aa7.53□□□□□ -1.2
CPNE3-206ENST00000523469 ABCF2Q9UG63 623 aa7.53□□□□□ -1.2
CPNE3-206ENST00000523469 FEZ2Q9UHY8 353 aaPredicted RBP7.53□□□□□ -1.2
CPNE3-206ENST00000523469 USP15Q9Y4E8 981 aaPredicted RBP7.53□□□□□ -1.2
CPNE3-206ENST00000523469 PCF11O94913 1555 aaKnown RBP7.52□□□□□ -1.21
CPNE3-206ENST00000523469 CDHR4A6H8M9 788 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 CKBP12277 381 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 INSRRP14616 1297 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 TYRP14679 529 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 PRDX5P30044 214 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 PTTG1IPP53801 180 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 NKX6-1P78426 367 aaPredicted RBP7.52□□□□□ -1.21
CPNE3-206ENST00000523469 SLC25A3Q00325 362 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 GFOD2Q3B7J2 385 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 MIIPQ5JXC2 388 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 ZNF365Q70YC5 407 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 ZFPM1Q8IX07 1006 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 ZBTB34Q8NCN2 500 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 TTC8Q8TAM2 541 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 KLHDC4Q8TBB5 520 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 TBC1D15Q8TC07 691 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 NUP133Q8WUM0 1156 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 ZNF503Q96F45 646 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 C1orf112Q9NSG2 853 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 ATP11BQ9Y2G3 1177 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 CUX1P39880 1505 aa7.52□□□□□ -1.21
CPNE3-206ENST00000523469 GAGE12BA1L429 117 aa7.51□□□□□ -1.21
CPNE3-206ENST00000523469 GAGE12HA6NDE8 117 aa7.51□□□□□ -1.21
CPNE3-206ENST00000523469 ZNF185O15231 689 aa7.51□□□□□ -1.21
CPNE3-206ENST00000523469 RPS6KA4O75676 772 aa7.51□□□□□ -1.21
CPNE3-206ENST00000523469 UBXN7O94888 489 aa7.51□□□□□ -1.21
CPNE3-206ENST00000523469 GNAI3P08754 354 aa7.51□□□□□ -1.21
CPNE3-206ENST00000523469 GNAI1P63096 354 aa7.51□□□□□ -1.21
CPNE3-206ENST00000523469 ZXDCQ2QGD7 858 aaPredicted RBP7.51□□□□□ -1.21
CPNE3-206ENST00000523469 ARHGAP29Q52LW3 1261 aa7.51□□□□□ -1.21
CPNE3-206ENST00000523469 PDCD4Q53EL6 469 aaKnown RBP7.51□□□□□ -1.21
CPNE3-206ENST00000523469 TSHZ3Q63HK5 1081 aa7.51□□□□□ -1.21
CPNE3-206ENST00000523469 FAM90A1Q86YD7 464 aa7.51□□□□□ -1.21
CPNE3-206ENST00000523469 ZNF276Q8N554 614 aa7.51□□□□□ -1.21
CPNE3-206ENST00000523469 AOPEPQ8N6M6 819 aa7.51□□□□□ -1.21
CPNE3-206ENST00000523469 OR56A1Q8NGH5 318 aa7.51□□□□□ -1.21
CPNE3-206ENST00000523469 MTFMTQ96DP5 389 aaKnown RBP7.51□□□□□ -1.21
CPNE3-206ENST00000523469 KLHL11Q9NVR0 708 aa7.51□□□□□ -1.21
CPNE3-206ENST00000523469 PNPOQ9NVS9 261 aa7.51□□□□□ -1.21
CPNE3-206ENST00000523469 GABBR1Q9UBS5 961 aa7.51□□□□□ -1.21
CPNE3-206ENST00000523469 TEX14Q8IWB6 1497 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 H3BUI4 141 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 RNASET2O00584 256 aaKnown RBP7.5□□□□□ -1.21
CPNE3-206ENST00000523469 B3GALT2O43825 422 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 PRSS23O95084 383 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 ANXA1P04083 346 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 ATF3P18847 181 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 HTR1BP28222 390 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 PIK3CGP48736 1102 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 CCDC93Q567U6 631 aa7.5□□□□□ -1.21
CPNE3-206ENST00000523469 UTP14CQ5TAP6 766 aaKnown RBP7.5□□□□□ -1.21
CPNE3-206ENST00000523469 C14orf80Q86SX3 495 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms