RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 ENPP3O14638 875 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 RAB11FIP3O75154 756 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 EIF3JO75822 258 aaKnown RBP7.33□□□□□ -1.24
VPS13B-211ENST00000522802 TOP1P11387 765 aaKnown RBP7.33□□□□□ -1.24
VPS13B-211ENST00000522802 GRIK1P39086 918 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 TECP42680 631 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 ERVFC1P60507 584 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 ADAM17P78536 824 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 KCNC3Q14003 757 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 MSMPQ1L6U9 139 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 SFRP5Q5T4F7 317 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 ANKRD54Q6NXT1 300 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 CCDC105Q8IYK2 499 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 FAM181AQ8N9Y4 354 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 FLCNQ8NFG4 579 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 OR6P1Q8NGX9 317 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 FEZF2Q8TBJ5 459 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 KCNG4Q8TDN1 519 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 MFSD1Q9H3U5 465 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 DLL3Q9NYJ7 618 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 R4GN57 208 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 ZZEF1O43149 2961 aa7.33□□□□□ -1.24
VPS13B-211ENST00000522802 ABCB11O95342 1321 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 KAT6AQ92794 2004 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 ORC4O43929 436 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 ZFYP08048 801 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-211ENST00000522802 FGRP09769 529 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 WEE2P0C1S8 567 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 SNHG28P0DPA3 235 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 MYCLP12524 364 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-211ENST00000522802 AOC1P19801 751 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 POLR2BP30876 1174 aaKnown RBP7.32□□□□□ -1.24
VPS13B-211ENST00000522802 CD52P31358 61 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 GBP1P32455 592 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 CLCN5P51795 746 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 PUM1Q14671 1186 aaKnown RBP eCLIP7.32□□□□□ -1.24
VPS13B-211ENST00000522802 ST3GAL2Q16842 350 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 FBXO47Q5MNV8 452 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 VPS53Q5VIR6 699 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 PLPP4Q5VZY2 271 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 MCF2L2Q86YR7 1114 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 DCLK2Q8N568 766 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 CYP2W1Q8TAV3 490 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 CPLX3Q8WVH0 158 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 ZBTB10Q96DT7 871 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 UBA5Q9GZZ9 404 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.32□□□□□ -1.24
VPS13B-211ENST00000522802 AGO3Q9H9G7 860 aaKnown RBP7.32□□□□□ -1.24
VPS13B-211ENST00000522802 ECHDC1Q9NTX5 307 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 PNMA2Q9UL42 364 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 ASPMQ8IZT6 3477 aa7.32□□□□□ -1.24
VPS13B-211ENST00000522802 C2orf16Q68DN1 1984 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 ANKRD11Q6UB99 2663 aaPredicted RBP7.31□□□□□ -1.24
VPS13B-211ENST00000522802 HIDE1A8MVS5 230 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 HMMRO75330 724 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 FGF18O76093 207 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 LMNAP02545 664 aaKnown RBP7.31□□□□□ -1.24
VPS13B-211ENST00000522802 IBSPP21815 317 aaPredicted RBP7.31□□□□□ -1.24
VPS13B-211ENST00000522802 GUCY2CP25092 1073 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 HOXA13P31271 388 aaPredicted RBP7.31□□□□□ -1.24
VPS13B-211ENST00000522802 DNAJA1P31689 397 aaKnown RBP7.31□□□□□ -1.24
VPS13B-211ENST00000522802 PGM5Q15124 567 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 NKPD1Q17RQ9 610 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 QRICH1Q2TAL8 776 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 RRP12Q5JTH9 1297 aaKnown RBP7.31□□□□□ -1.24
VPS13B-211ENST00000522802 TMEM184AQ6ZMB5 413 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 TSHZ1Q6ZSZ6 1077 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 RTN4RL1Q86UN2 441 aaPredicted RBP7.31□□□□□ -1.24
VPS13B-211ENST00000522802 DTWD2Q8NBA8 298 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 NETO1Q8TDF5 533 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 MICAL1Q8TDZ2 1067 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 KREMEN1Q96MU8 473 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 CDCA3Q99618 268 aaPredicted RBP7.31□□□□□ -1.24
VPS13B-211ENST00000522802 PDCD2LQ9BRP1 358 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 LRRCC1Q9C099 1032 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 TNKS2Q9H2K2 1166 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 TOMM22Q9NS69 142 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 NR2E1Q9Y466 385 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 CDY2AQ9Y6F7 541 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 FAM208BQ5VWN6 2430 aa7.31□□□□□ -1.24
VPS13B-211ENST00000522802 PKD1L2Q7Z442 2459 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 ZFYVE26Q68DK2 2539 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 KIAA1324LA8MWY0 1029 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-211ENST00000522802 NOP56O00567 594 aaKnown RBP7.3□□□□□ -1.24
VPS13B-211ENST00000522802 PPP1R11O60927 126 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-211ENST00000522802 CFBP00751 764 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 CEACAM5P06731 702 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 SRGAP2BP0DMP2 458 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 HSPD1P10809 573 aaKnown RBP7.3□□□□□ -1.24
VPS13B-211ENST00000522802 SCG2P13521 617 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 SSTR4P31391 388 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 KIR3DL1P43629 444 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 HSD17B4P51659 736 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 SP4Q02446 784 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 UTP14CQ5TAP6 766 aaKnown RBP7.3□□□□□ -1.24
VPS13B-211ENST00000522802 DTX1Q86Y01 620 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 SPACA3Q8IXA5 215 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 ADGRF4Q8IZF3 695 aa7.3□□□□□ -1.24
VPS13B-211ENST00000522802 PLD6Q8N2A8 252 aaKnown RBP7.3□□□□□ -1.24
VPS13B-211ENST00000522802 FAM169BQ8N8A8 192 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms