RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 BRD9Q9H8M2 597 aa6.77□□□□□ -1.33
NPM1-206ENST00000519955 CNNM1Q9NRU3 951 aa6.77□□□□□ -1.33
NPM1-206ENST00000519955 EIF2B4Q9UI10 523 aaKnown RBP6.77□□□□□ -1.33
NPM1-206ENST00000519955 TSC22D4Q9Y3Q8 395 aa6.77□□□□□ -1.33
NPM1-206ENST00000519955 PCDHA1Q9Y5I3 950 aa6.77□□□□□ -1.33
NPM1-206ENST00000519955 LEFTY2O00292 366 aa6.76□□□□□ -1.33
NPM1-206ENST00000519955 RHCEP18577 417 aa6.76□□□□□ -1.33
NPM1-206ENST00000519955 SLC6A2P23975 617 aa6.76□□□□□ -1.33
NPM1-206ENST00000519955 APOBEC3AP31941 199 aaPredicted RBP6.76□□□□□ -1.33
NPM1-206ENST00000519955 FAM193AP78312 1265 aa6.76□□□□□ -1.33
NPM1-206ENST00000519955 RHDQ02161 417 aa6.76□□□□□ -1.33
NPM1-206ENST00000519955 GALEQ14376 348 aa6.76□□□□□ -1.33
NPM1-206ENST00000519955 FAM102AQ5T9C2 384 aaPredicted RBP6.76□□□□□ -1.33
NPM1-206ENST00000519955 AGAP9Q5VTM2 703 aa6.76□□□□□ -1.33
NPM1-206ENST00000519955 CYB5RLQ6IPT4 315 aa6.76□□□□□ -1.33
NPM1-206ENST00000519955 CCDC149Q6ZUS6 474 aa6.76□□□□□ -1.33
NPM1-206ENST00000519955 PPP1R3BQ86XI6 285 aa6.76□□□□□ -1.33
NPM1-206ENST00000519955 RHOT2Q8IXI1 618 aa6.76□□□□□ -1.33
NPM1-206ENST00000519955 TBC1D15Q8TC07 691 aa6.76□□□□□ -1.33
NPM1-206ENST00000519955 NUP133Q8WUM0 1156 aa6.76□□□□□ -1.33
NPM1-206ENST00000519955 C1orf43Q9BWL3 253 aa6.76□□□□□ -1.33
NPM1-206ENST00000519955 KRTAP9-3Q9BYQ3 159 aa6.76□□□□□ -1.33
NPM1-206ENST00000519955 GRXCR1A8MXD5 290 aa6.75□□□□□ -1.33
NPM1-206ENST00000519955 PHGDHO43175 533 aaKnown RBP6.75□□□□□ -1.33
NPM1-206ENST00000519955 MATN4O95460 622 aa6.75□□□□□ -1.33
NPM1-206ENST00000519955 KRT18P05783 430 aaKnown RBP6.75□□□□□ -1.33
NPM1-206ENST00000519955 SPATA31D3P0C874 917 aa6.75□□□□□ -1.33
NPM1-206ENST00000519955 CKBP12277 381 aa6.75□□□□□ -1.33
NPM1-206ENST00000519955 GCSHP23434 173 aa6.75□□□□□ -1.33
NPM1-206ENST00000519955 PURAQ00577 322 aaKnown RBP6.75□□□□□ -1.33
NPM1-206ENST00000519955 KIF22Q14807 665 aa6.75□□□□□ -1.33
NPM1-206ENST00000519955 CNN3Q15417 329 aaKnown RBP6.75□□□□□ -1.33
NPM1-206ENST00000519955 KHDC1LQ5JSQ8 128 aa6.75□□□□□ -1.33
NPM1-206ENST00000519955 UTP14CQ5TAP6 766 aaKnown RBP6.75□□□□□ -1.33
NPM1-206ENST00000519955 EMC10Q5UCC4 262 aa6.75□□□□□ -1.33
NPM1-206ENST00000519955 DARS2Q6PI48 645 aaKnown RBP6.75□□□□□ -1.33
NPM1-206ENST00000519955 SPATA31D4Q6ZUB0 917 aa6.75□□□□□ -1.33
NPM1-206ENST00000519955 FAM156AQ8NDB6 213 aa6.75□□□□□ -1.33
NPM1-206ENST00000519955 TNPO1Q92973 898 aaKnown RBP6.75□□□□□ -1.33
NPM1-206ENST00000519955 DDX21Q9NR30 783 aaKnown RBP eCLIP6.75□□□□□ -1.33
NPM1-206ENST00000519955 SORCS3Q9UPU3 1222 aa6.75□□□□□ -1.33
NPM1-206ENST00000519955 ATP11BQ9Y2G3 1177 aa6.75□□□□□ -1.33
NPM1-206ENST00000519955 A0A1W2PPL8 197 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 GOLIM4O00461 696 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 AGFG2O95081 481 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 GJB1P08034 283 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 RNASE9P60153 205 aaKnown RBP6.74□□□□□ -1.33
NPM1-206ENST00000519955 CDSNQ15517 529 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 KIAA0753Q2KHM9 967 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 RABL3Q5HYI8 236 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 RNF220Q5VTB9 566 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 METRNLQ641Q3 311 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 ZFPM1Q8IX07 1006 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 CCAR1Q8IX12 1150 aaKnown RBP6.74□□□□□ -1.33
NPM1-206ENST00000519955 SCAMP4Q969E2 229 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 SARGQ9BW04 601 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 ZNF703Q9H7S9 590 aaPredicted RBP6.74□□□□□ -1.33
NPM1-206ENST00000519955 SLAMF7Q9NQ25 335 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 PIH1D1Q9NWS0 290 aaKnown RBP6.74□□□□□ -1.33
NPM1-206ENST00000519955 PARPBPQ9NWS1 579 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 STAP2Q9UGK3 403 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 PCDHA6Q9UN73 950 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 CHST2Q9Y4C5 530 aa6.74□□□□□ -1.33
NPM1-206ENST00000519955 USP15Q9Y4E8 981 aaPredicted RBP6.74□□□□□ -1.33
NPM1-206ENST00000519955 CFAP69A5D8W1 941 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 FRS3O43559 492 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 SCAF4O95104 1147 aaKnown RBP6.73□□□□□ -1.33
NPM1-206ENST00000519955 AHSGP02765 367 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 GNAI2P04899 355 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 MYL1P05976 194 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 RARBP10826 455 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 TRIM27P14373 513 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 TOB2Q14106 344 aaPredicted RBP6.73□□□□□ -1.33
NPM1-206ENST00000519955 USP39Q53GS9 565 aaKnown RBP6.73□□□□□ -1.33
NPM1-206ENST00000519955 SPDYAQ5MJ70 313 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 TSHZ3Q63HK5 1081 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 GDF7Q7Z4P5 450 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 PRRT2Q7Z6L0 340 aaPredicted RBP6.73□□□□□ -1.33
NPM1-206ENST00000519955 C1orf210Q8IVY1 113 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 IL17DQ8TAD2 202 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 CPT1CQ8TCG5 803 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 LRTOMTQ8WZ04 291 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 NT5C1BQ96P26 610 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 NEU1Q99519 415 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 SIK2Q9H0K1 926 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 RNPEPQ9H4A4 650 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 ZMAT3Q9HA38 289 aaKnown RBP6.73□□□□□ -1.33
NPM1-206ENST00000519955 RSAD1Q9HA92 442 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 GPR35Q9HC97 309 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.73□□□□□ -1.33
NPM1-206ENST00000519955 TRPM5Q9NZQ8 1165 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 CPA4Q9UI42 421 aa6.73□□□□□ -1.33
NPM1-206ENST00000519955 PRSS29PA6NIE9 313 aa6.72□□□□□ -1.33
NPM1-206ENST00000519955 MGEA5O60502 916 aa6.72□□□□□ -1.33
NPM1-206ENST00000519955 PRSS23O95084 383 aa6.72□□□□□ -1.33
NPM1-206ENST00000519955 CHEK2O96017 543 aa6.72□□□□□ -1.33
NPM1-206ENST00000519955 SOX8P57073 446 aa6.72□□□□□ -1.33
NPM1-206ENST00000519955 NOMO3P69849 1222 aa6.72□□□□□ -1.33
NPM1-206ENST00000519955 NOMO2Q5JPE7 1267 aa6.72□□□□□ -1.33
NPM1-206ENST00000519955 KRTAP5-3Q6L8H2 238 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms