RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 CCDC157Q569K6 752 aa7.81□□□□□ -1.16
PTPN12-213ENST00000519553 COL23A1Q86Y22 540 aaPredicted RBP7.81□□□□□ -1.16
PTPN12-213ENST00000519553 FITM2Q8N6M3 262 aa7.81□□□□□ -1.16
PTPN12-213ENST00000519553 OR56A1Q8NGH5 318 aa7.81□□□□□ -1.16
PTPN12-213ENST00000519553 TMEM60Q9H2L4 133 aa7.81□□□□□ -1.16
PTPN12-213ENST00000519553 KLHL11Q9NVR0 708 aa7.81□□□□□ -1.16
PTPN12-213ENST00000519553 USP15Q9Y4E8 981 aaPredicted RBP7.81□□□□□ -1.16
PTPN12-213ENST00000519553 H3BUI4 141 aa7.8□□□□□ -1.16
PTPN12-213ENST00000519553 NR4A1P22736 598 aa7.8□□□□□ -1.16
PTPN12-213ENST00000519553 NOMO3P69849 1222 aa7.8□□□□□ -1.16
PTPN12-213ENST00000519553 ANO6Q4KMQ2 910 aa7.8□□□□□ -1.16
PTPN12-213ENST00000519553 NOMO2Q5JPE7 1267 aa7.8□□□□□ -1.16
PTPN12-213ENST00000519553 UTP14CQ5TAP6 766 aaKnown RBP7.8□□□□□ -1.16
PTPN12-213ENST00000519553 CYB5RLQ6IPT4 315 aa7.8□□□□□ -1.16
PTPN12-213ENST00000519553 SWSAP1Q6NVH7 229 aa7.8□□□□□ -1.16
PTPN12-213ENST00000519553 NPNTQ6UXI9 565 aa7.8□□□□□ -1.16
PTPN12-213ENST00000519553 LRRC55Q6ZSA7 311 aa7.8□□□□□ -1.16
PTPN12-213ENST00000519553 KIAA0319LQ8IZA0 1049 aa7.8□□□□□ -1.16
PTPN12-213ENST00000519553 TBC1D15Q8TC07 691 aa7.8□□□□□ -1.16
PTPN12-213ENST00000519553 ZNF503Q96F45 646 aa7.8□□□□□ -1.16
PTPN12-213ENST00000519553 ARMT1Q9H993 441 aa7.8□□□□□ -1.16
PTPN12-213ENST00000519553 PARPBPQ9NWS1 579 aa7.8□□□□□ -1.16
PTPN12-213ENST00000519553 TRPM5Q9NZQ8 1165 aa7.8□□□□□ -1.16
PTPN12-213ENST00000519553 MARCH11A6NNE9 402 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 FAM227AF5H4B4 570 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 RPS6KA4O75676 772 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 RECQL4O94761 1208 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 AGFG2O95081 481 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 AHSGP02765 367 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 USP14P54578 494 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 DGCR2P98153 550 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 CHST15Q7LFX5 561 aaPredicted RBP7.79□□□□□ -1.16
PTPN12-213ENST00000519553 CELF5Q8N6W0 485 aaKnown RBP7.79□□□□□ -1.16
PTPN12-213ENST00000519553 TMIEQ8NEW7 156 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 NUP133Q8WUM0 1156 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 KLHL32Q96NJ5 620 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 NT5C1BQ96P26 610 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 GPR20Q99678 358 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 SLC46A2Q9BY10 475 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 PRDM11Q9NQV5 511 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 GNL3LQ9NVN8 582 aaKnown RBP7.79□□□□□ -1.16
PTPN12-213ENST00000519553 RLIMQ9NVW2 624 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 PCDHA1Q9Y5I3 950 aa7.79□□□□□ -1.16
PTPN12-213ENST00000519553 CKBP12277 381 aa7.78□□□□□ -1.16
PTPN12-213ENST00000519553 FCER1AP12319 257 aa7.78□□□□□ -1.16
PTPN12-213ENST00000519553 OCA2Q04671 838 aa7.78□□□□□ -1.16
PTPN12-213ENST00000519553 MIIPQ5JXC2 388 aa7.78□□□□□ -1.16
PTPN12-213ENST00000519553 TSHZ3Q63HK5 1081 aa7.78□□□□□ -1.16
PTPN12-213ENST00000519553 DAAM2Q86T65 1068 aa7.78□□□□□ -1.16
PTPN12-213ENST00000519553 DGKHQ86XP1 1220 aa7.78□□□□□ -1.16
PTPN12-213ENST00000519553 MTFMTQ96DP5 389 aaKnown RBP7.78□□□□□ -1.16
PTPN12-213ENST00000519553 PLEKHG4BQ96PX9 1271 aa7.78□□□□□ -1.16
PTPN12-213ENST00000519553 TLR10Q9BXR5 811 aa7.78□□□□□ -1.16
PTPN12-213ENST00000519553 STAP2Q9UGK3 403 aa7.78□□□□□ -1.16
PTPN12-213ENST00000519553 ZDHHC8Q9ULC8 765 aa7.78□□□□□ -1.16
PTPN12-213ENST00000519553 GJB1P08034 283 aa7.77□□□□□ -1.17
PTPN12-213ENST00000519553 ELANEP08246 267 aa7.77□□□□□ -1.17
PTPN12-213ENST00000519553 FOXE3Q13461 319 aa7.77□□□□□ -1.17
PTPN12-213ENST00000519553 KIF22Q14807 665 aa7.77□□□□□ -1.17
PTPN12-213ENST00000519553 HSP90AB2PQ58FF8 381 aa7.77□□□□□ -1.17
PTPN12-213ENST00000519553 EMC10Q5UCC4 262 aa7.77□□□□□ -1.17
PTPN12-213ENST00000519553 PDSS2Q86YH6 399 aa7.77□□□□□ -1.17
PTPN12-213ENST00000519553 ZNF276Q8N554 614 aa7.77□□□□□ -1.17
PTPN12-213ENST00000519553 BRIX1Q8TDN6 353 aaKnown RBP7.77□□□□□ -1.17
PTPN12-213ENST00000519553 TNPO1Q92973 898 aaKnown RBP7.77□□□□□ -1.17
PTPN12-213ENST00000519553 TIFAQ96CG3 184 aa7.77□□□□□ -1.17
PTPN12-213ENST00000519553 ZSWIM1Q9BR11 485 aa7.77□□□□□ -1.17
PTPN12-213ENST00000519553 ATP6V0A4Q9HBG4 840 aa7.77□□□□□ -1.17
PTPN12-213ENST00000519553 HSFX1Q9UBD0 423 aa7.77□□□□□ -1.17
PTPN12-213ENST00000519553 ATP11BQ9Y2G3 1177 aa7.77□□□□□ -1.17
PTPN12-213ENST00000519553 FRMPD2Q68DX3 1309 aaPredicted RBP7.77□□□□□ -1.17
PTPN12-213ENST00000519553 AATKQ6ZMQ8 1374 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 A0A1B0GTW7 788 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 E9PLN8 166 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 TPP1O14773 563 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 NCR1O76036 304 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 GNAI3P08754 354 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 FGFR4P22455 802 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 PHKA1P46020 1223 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 GNAI1P63096 354 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 FGL2Q14314 439 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 LLGL1Q15334 1064 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 SLC25A43Q8WUT9 341 aaPredicted RBP7.76□□□□□ -1.17
PTPN12-213ENST00000519553 MARS2Q96GW9 593 aaKnown RBP7.76□□□□□ -1.17
PTPN12-213ENST00000519553 VKORC1Q9BQB6 163 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 KRTAP4-2Q9BYR5 136 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 REXO4Q9GZR2 422 aaKnown RBP7.76□□□□□ -1.17
PTPN12-213ENST00000519553 RNPEPQ9H4A4 650 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 BRD9Q9H8M2 597 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 FAM204AQ9H8W3 233 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 ZMAT3Q9HA38 289 aaKnown RBP7.76□□□□□ -1.17
PTPN12-213ENST00000519553 GPR35Q9HC97 309 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 SLAMF7Q9NQ25 335 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 VSX1Q9NZR4 365 aaPredicted RBP7.76□□□□□ -1.17
PTPN12-213ENST00000519553 CFAP97Q9P2B7 532 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 USP25Q9UHP3 1055 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 PCDHA6Q9UN73 950 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 L1RE1Q9UN81 338 aa7.76□□□□□ -1.17
PTPN12-213ENST00000519553 GAGE12BA1L429 117 aa7.75□□□□□ -1.17
PTPN12-213ENST00000519553 GAGE12HA6NDE8 117 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms