RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	TRPC3	Q13507	836 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	NCOA4	Q13772	614 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	KRT31	Q15323	416 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	FILIP1L	Q4L180	1135 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	MIIP	Q5JXC2	388 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	TCERG1L	Q5VWI1	586 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	TDRD10	Q5VZ19	366 aa	Known RBP	11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	APTX	Q7Z2E3	356 aa	Known RBP	11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	DDX53	Q86TM3	631 aa	Known RBP	11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	SLC39A11	Q8N1S5	342 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	TTC39C	Q8N584	583 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	COLGALT1	Q8NBJ5	622 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	CCDC150	Q8NCX0	1101 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	EHBP1	Q8NDI1	1231 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	JAKMIP2	Q96AA8	810 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	IGSF21	Q96ID5	467 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	ZNF560	Q96MR9	790 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	SLC28A3	Q9HAS3	691 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	PCDH10	Q9P2E7	1040 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	PUF60	Q9UHX1	559 aa	Known RBP	11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	SIX4	Q9UIU6	781 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	SSX2IP	Q9Y2D8	614 aa		11.64	□□□□□ -0.55
CHTF8-206	ENST00000519534	PTPRJ	Q12913	1337 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	PDE4DIP	Q5VU43	2346 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	KPNA7	A9QM74	516 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534		M0QZQ0	153 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	SYN3	O14994	580 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	C1R	P00736	705 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	ASS1	P00966	412 aa	Known RBP	11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	ITGB3	P05106	788 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	CA3	P07451	260 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	P4HA1	P13674	534 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	IBSP	P21815	317 aa	Predicted RBP	11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	OR1G1	P47890	313 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	SLC11A1	P49279	550 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	RABGGTB	P53611	331 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	COPB1	P53618	953 aa	Known RBP	11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	BIRC3	Q13489	604 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	BMS1	Q14692	1282 aa	Known RBP	11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	NR1I3	Q14994	352 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	SV2C	Q496J9	727 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	PAN2	Q504Q3	1202 aa	Known RBP	11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	DCAF17	Q5H9S7	520 aa	Predicted RBP	11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	WDR44	Q5JSH3	913 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	FKBP15	Q5T1M5	1219 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	SPOUT1	Q5T280	376 aa	Known RBP	11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	PDE12	Q6L8Q7	609 aa	Known RBP	11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	PDXDC1	Q6P996	788 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	CD300LG	Q6UXG3	332 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	LIMS2	Q7Z4I7	341 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	CREBRF	Q8IUR6	639 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	RNF168	Q8IYW5	571 aa	Predicted RBP	11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	TIFA	Q96CG3	184 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	TMEM169	Q96HH4	297 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	HPDL	Q96IR7	371 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	SUSD3	Q96L08	255 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	IMPG2	Q9BZV3	1241 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	LMAN2L	Q9H0V9	348 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	XYLT2	Q9H1B5	865 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	RTN4	Q9NQC3	1192 aa	Known RBP	11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	DNAJB4	Q9UDY4	337 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	TUBGCP4	Q9UGJ1	667 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	ADAM28	Q9UKQ2	775 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	DSE	Q9UL01	958 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	AGAP1	Q9UPQ3	857 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	YBX2	Q9Y2T7	364 aa	Known RBP	11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	MICAL3	Q7RTP6	2002 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	CEP290	O15078	2479 aa		11.63	□□□□□ -0.55
CHTF8-206	ENST00000519534	TNRC18	O15417	2968 aa	Predicted RBP	11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534		A0A1B0GTH6	734 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534		A0A1W2PQC6	194 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	LCHN	A4D1U4	455 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	CASTOR2	A6NHX0	329 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	LGALS16	A8MUM7	142 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534		H3BNC9	293 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	B4GALT3	O60512	393 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	VNN1	O95497	513 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	HLA-DRA	P01903	254 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	CYP11A1	P05108	521 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	TPM3	P06753	285 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	TRIM49	P0CI25	452 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	TRIM49C	P0CI26	452 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	TYMP	P19971	482 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	DNAJB2	P25686	324 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	POLR2B	P30876	1174 aa	Known RBP	11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	EXOC3L4	Q17RC7	722 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	CBWD6	Q4V339	395 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	EPC2	Q52LR7	807 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	CBWD3	Q5JTY5	395 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	CBWD5	Q5RIA9	395 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	SARM1	Q6SZW1	724 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	GBP6	Q6ZN66	633 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	ENOSF1	Q7L5Y1	443 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	TMEM86A	Q8N2M4	240 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	TOP6BL	Q8N6T0	577 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	APPL2	Q8NEU8	664 aa		11.62	□□□□□ -0.55
CHTF8-206	ENST00000519534	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.62	□□□□□ -0.55

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