RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 MCMBPQ9BTE3 642 aa7.19□□□□□ -1.26
CCDC6-203ENST00000518638 LMAN2LQ9H0V9 348 aa7.19□□□□□ -1.26
CCDC6-203ENST00000518638 XYLT2Q9H1B5 865 aa7.19□□□□□ -1.26
CCDC6-203ENST00000518638 HOMER2Q9NSB8 354 aa7.19□□□□□ -1.26
CCDC6-203ENST00000518638 RNF146Q9NTX7 359 aa7.19□□□□□ -1.26
CCDC6-203ENST00000518638 CLDND1Q9NY35 253 aa7.19□□□□□ -1.26
CCDC6-203ENST00000518638 TNFRSF10DQ9UBN6 386 aa7.19□□□□□ -1.26
CCDC6-203ENST00000518638 MSRB2Q9Y3D2 182 aa7.19□□□□□ -1.26
CCDC6-203ENST00000518638 RWDD3Q9Y3V2 267 aa7.19□□□□□ -1.26
CCDC6-203ENST00000518638 TET1Q8NFU7 2136 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 TECTAO75443 2155 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 NLRC5Q86WI3 1866 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 TEX51A0A1B0GUA7 166 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 H3BNC9 293 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 AURKAO14965 403 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 FGF10O15520 208 aaPredicted RBP7.18□□□□□ -1.26
CCDC6-203ENST00000518638 PSPNO60542 156 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 SURF6O75683 361 aaKnown RBP7.18□□□□□ -1.26
CCDC6-203ENST00000518638 IFNGR1P15260 489 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 TRHRP34981 398 aaPredicted RBP7.18□□□□□ -1.26
CCDC6-203ENST00000518638 DEFB103AP81534 67 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 SIGLEC14Q08ET2 396 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 PPP2R5BQ15173 497 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 PTGISQ16647 500 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 SLC10A6Q3KNW5 377 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 SV2CQ496J9 727 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 EPC2Q52LR7 807 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 TCEAL5Q5H9L2 206 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 EGFLAMQ63HQ2 1017 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 RPAINQ86UA6 219 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 TRIM59Q8IWR1 403 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 LCORLQ8N3X6 602 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 GMCL1P1Q8NEA9 526 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 MORC4Q8TE76 937 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 SSH3Q8TE77 659 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 MRGPRX3Q96LB0 322 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 NUP88Q99567 741 aaPredicted RBP7.18□□□□□ -1.26
CCDC6-203ENST00000518638 WDR11Q9BZH6 1224 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.18□□□□□ -1.26
CCDC6-203ENST00000518638 PNMA2Q9UL42 364 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 ZNF532Q9HCE3 1301 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 MICAL3Q7RTP6 2002 aa7.18□□□□□ -1.26
CCDC6-203ENST00000518638 TRIP12Q14669 1992 aaPredicted RBP7.17□□□□□ -1.26
CCDC6-203ENST00000518638 FSD2A1L4K1 749 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 FADS2P1A8MWK0 482 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 STXBP3O00186 592 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 NOP56O00567 594 aaKnown RBP7.17□□□□□ -1.26
CCDC6-203ENST00000518638 ANP32CO43423 234 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 MBTPS2O43462 519 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 RB1P06400 928 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 CYP2D6P10635 497 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 HTRA4P83105 476 aaPredicted RBP7.17□□□□□ -1.26
CCDC6-203ENST00000518638 ZXDAP98168 799 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 SLFN5Q08AF3 891 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 IKQ13123 557 aaPredicted RBP7.17□□□□□ -1.26
CCDC6-203ENST00000518638 GPM6BQ13491 265 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 DPY19L1Q2PZI1 675 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 SDE2Q6IQ49 451 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 RCSD1Q6JBY9 416 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 ZNF227Q86WZ6 799 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 LRRC47Q8N1G4 583 aaKnown RBP7.17□□□□□ -1.26
CCDC6-203ENST00000518638 SCFD2Q8WU76 684 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 YME1L1Q96TA2 773 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 C17orf80Q9BSJ5 609 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 FSD1Q9BTV5 496 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 C11orf84Q9BUA3 381 aaPredicted RBP7.17□□□□□ -1.26
CCDC6-203ENST00000518638 KATNAL1Q9BW62 490 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 CYP39A1Q9NYL5 469 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 SIRPGQ9P1W8 387 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 NOP58Q9Y2X3 529 aaKnown RBP7.17□□□□□ -1.26
CCDC6-203ENST00000518638 ZBED9Q6R2W3 1325 aa7.17□□□□□ -1.26
CCDC6-203ENST00000518638 TCRBV5S4A2TA0A5A2 114 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 NOTOA8MTQ0 251 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 NRDCO43847 1150 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 PLA2G6O60733 806 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 MBD4O95243 580 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 KCNH1O95259 989 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 TTLL1O95922 423 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 CKBP12277 381 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 ALAS1P13196 640 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 AVPR2P30518 371 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 SERINC3Q13530 473 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 HSP90AB4PQ58FF6 505 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 CYP2R1Q6VVX0 501 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 CEP128Q6ZU80 1094 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 MYOCDQ8IZQ8 938 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 NAT16Q8N8M0 369 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 TMEM52Q8NDY8 209 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 ST13P5Q8NFI4 369 aaPredicted RBP7.16□□□□□ -1.26
CCDC6-203ENST00000518638 MKL1Q969V6 931 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 PPP1R14AQ96A00 147 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 EAF2Q96CJ1 260 aaPredicted RBP7.16□□□□□ -1.26
CCDC6-203ENST00000518638 CCDC8Q9H0W5 538 aaPredicted RBP7.16□□□□□ -1.26
CCDC6-203ENST00000518638 ARMT1Q9H993 441 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 GCM1Q9NP62 436 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 PDGFCQ9NRA1 345 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 CLIP2Q9UDT6 1046 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 CD207Q9UJ71 328 aa7.16□□□□□ -1.26
CCDC6-203ENST00000518638 ISY1Q9ULR0 285 aaKnown RBP7.16□□□□□ -1.26
CCDC6-203ENST00000518638 GPR55Q9Y2T6 319 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms