RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 PGK1P00558 417 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 CALCAP01258 141 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 CYP1A1P04798 512 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 C6orf222P0C671 652 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 TMEM191BP0C7N4 346 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 CTAGE8P0CG41 777 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 RARBP10826 455 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 KRT5P13647 590 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 H2AFXP16104 143 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 ZSCAN20P17040 1043 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 FGFR4P22455 802 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 CST5P28325 142 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 CCND3P30281 292 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 ATICP31939 592 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 MAP2K2P36507 400 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 ASPAP45381 313 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 NOP2P46087 812 aaKnown RBP5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 APLP1P51693 650 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 CRYBB1P53674 252 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 CKAP4Q07065 602 aaKnown RBP5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 TMEM62Q0P6H9 643 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 TRPC3Q13507 836 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 SNX17Q15036 470 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 TMEM132AQ24JP5 1023 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 NBPF20Q3BBV1 942 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 XKR4Q5GH76 650 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 TAF3Q5VWG9 929 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 JADE1Q6IE81 842 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 TAF2Q6P1X5 1199 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 NOTUMQ6P988 496 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 SLC27A1Q6PCB7 646 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 TMEM270Q6UE05 265 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 TRIM72Q6ZMU5 477 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 PAXIP1Q6ZW49 1069 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 CATSPER4Q7RTX7 472 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 APBB1IPQ7Z5R6 666 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 RPAINQ86UA6 219 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 CTAGE6Q86UF2 777 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 NT5DC3Q86UY8 548 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 CTAGE4Q8IX94 777 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 RHOT2Q8IXI1 618 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 SYCE1Q8N0S2 351 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 C7orf31Q8N865 590 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 PPP1R13LQ8WUF5 828 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 TMEM40Q8WWA1 233 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 CTNNBL1Q8WYA6 563 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 GOLGA1Q92805 767 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 HES6Q96HZ4 224 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 PBKQ96KB5 322 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 RPGRIP1Q96KN7 1286 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 SCLT1Q96NL6 688 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 TSPAN18Q96SJ8 248 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 OSMRQ99650 979 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 ADPGKQ9BRR6 497 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 EIF2AQ9BY44 585 aaKnown RBP5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 IMPG2Q9BZV3 1241 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 NIF3L1Q9GZT8 377 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 FAM124BQ9H5Z6 455 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 SPC25Q9HBM1 224 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 OSGEPQ9NPF4 335 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 SRRDQ9UH36 339 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 GTF2IRD1Q9UHL9 959 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 COG5Q9UP83 839 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 HYOU1Q9Y4L1 999 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 PCDHB4Q9Y5E5 795 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 FRMPD3Q5JV73 1810 aa5.81□□□□□ -1.48
SCARNA20.4-201ENST00000516969 GRIN2DO15399 1336 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 NPTXRO95502 500 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 GNRH1P01148 92 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 RPLP2P05387 115 aaKnown RBP5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 CFHP08603 1231 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 WEE2P0C1S8 567 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 MYBL1P10243 752 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 ABCB4P21439 1286 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 HOXD10P28358 340 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 GNA15P30679 374 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 CXCR5P32302 372 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 CDH5P33151 784 aaPredicted RBP5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 YWHAEP62258 255 aaKnown RBP5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 RBP5P82980 135 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 CENPCQ03188 943 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 PTP4A2Q12974 167 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 TMEM132DQ14C87 1099 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 RPS6KA1Q15418 735 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 KCNA10Q16322 511 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 ZNF699Q32M78 642 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 UBXN11Q5T124 520 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 GDF6Q6KF10 455 aaPredicted RBP5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 C11orf63Q6NUN7 778 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 CXCL17Q6UXB2 119 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 DAAM2Q86T65 1068 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 SERINC5Q86VE9 423 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 PHF13Q86YI8 300 aaPredicted RBP5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 MCOLN2Q8IZK6 566 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 TMEM130Q8N3G9 435 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 MMGT1Q8N4V1 131 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 NOA1Q8NC60 698 aaKnown RBP5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 RBBP8NLQ8NC74 664 aaPredicted RBP5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 MSANTD4Q8NCY6 345 aa5.8□□□□□ -1.48
SCARNA20.4-201ENST00000516969 ACTRT1Q8TDG2 376 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms