RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 FN1P02751 2386 aaKnown RBP-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 NRP1O14786 923 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 JTBO76095 146 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 CFC1BP0CG36 223 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 CFC1P0CG37 223 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 GNAT1P11488 350 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 HSP90B1P14625 803 aaKnown RBP-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 HNRNPLP14866 589 aaKnown RBP eCLIP-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 APEX1P27695 318 aaKnown RBP-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 ARRB2P32121 409 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 RBMXP38159 391 aaKnown RBP-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 CASRP41180 1078 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 SPIRE1Q08AE8 756 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 MRPL49Q13405 166 aaKnown RBP-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 TESK1Q15569 626 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 CYP2A13Q16696 494 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 HABP4Q5JVS0 413 aaKnown RBP-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 VWA1Q6PCB0 445 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 FBXL19Q6PCT2 694 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 GK5Q6ZS86 529 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 RSRC2Q7L4I2 434 aaKnown RBP-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 ARHGAP30Q7Z6I6 1101 aaPredicted RBP-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 RELL1Q8IUW5 271 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 RHOT2Q8IXI1 618 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 ZZZ3Q8IYH5 903 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 ARFGAP1Q8N6T3 406 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 PNLDC1Q8NA58 520 aaKnown RBP-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 OR5AN1Q8NGI8 311 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 IL17RAQ96F46 866 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 LINC00167Q96N53 147 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 DOCK7Q96N67 2140 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 FAM118BQ9BPY3 351 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 NTPCRQ9BSD7 190 aaKnown RBP-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 LRRC3Q9BY71 257 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 TRIM55Q9BYV6 548 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 CYP26B1Q9NR63 512 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 ZNF214Q9UL59 606 aaPredicted RBP-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 HS3ST3B1Q9Y662 390 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 EP400Q96L91 3159 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 MYO9AB2RTY4 2548 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 WDR87Q6ZQQ6 2873 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 BOD1L1Q8NFC6 3051 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 LAMA5O15230 3695 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 TNXBP22105 4242 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 HECTD4Q9Y4D8 3996 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 ZMYM2Q9UBW7 1377 aa-0.06□□□□□ -2.42
SCARNA21.1-201ENST00000515996 PCNX1Q96RV3 2341 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 CUBNO60494 3623 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 SZT2Q5T011 3432 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 ZFHX4Q86UP3 3567 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 LMTK3Q96Q04 1460 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 LOC101059948A0A1B0GTJ6 334 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 A0A1B0GTW7 788 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 PRAMEF22A3QJZ6 481 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 PRAMEF25A6NGN4 478 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 CCDC85CA6NKD9 419 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 SHOX2O60902 331 aaPredicted RBP-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 URI1O94763 535 aaPredicted RBP-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 CHRM2P08172 466 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 RNF224P0DH78 156 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 PKMP14618 531 aaKnown RBP-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 ZBTB25P24278 435 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 CCT8P50990 548 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 CHN2P52757 468 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 HAP1P54257 671 aaPredicted RBP-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 MLLT10P55197 1068 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 LGALS4P56470 323 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 ANTXR2P58335 489 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 DSCR9P59020 149 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 SRPK2P78362 688 aaKnown RBP-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 PLCB2Q00722 1185 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 GEN1Q17RS7 908 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 ACBD5Q5T8D3 534 aaPredicted RBP-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 MEI1Q5TIA1 1274 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 GTF2IRD2BQ6EKJ0 949 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 FSTL4Q6MZW2 842 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 EFCAB12Q6NXP0 572 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 CEP85Q6P2H3 762 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 ZNF497Q6ZNH5 498 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 GTF2IRD2Q86UP8 949 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 CHSY1Q86X52 802 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 PPIL6Q8IXY8 311 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 FAM43AQ8N2R8 423 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 OR5M3Q8NGP4 307 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 ATOH8Q96SQ7 321 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 UHRF1Q96T88 793 aaPredicted RBP-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 NOC4LQ9BVI4 516 aaKnown RBP-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 NKX2-4Q9H2Z4 354 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 KCNE5Q9UJ90 142 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 POU2F3Q9UKI9 436 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 SCAF8Q9UPN6 1271 aaKnown RBP-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 GAB2Q9UQC2 676 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 AKT3Q9Y243 479 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 EMC9Q9Y3B6 208 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 ZFHX3Q15911 3703 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 COL6A6A6NMZ7 2263 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 STARD9Q9P2P6 4700 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 NBPF19A0A087WUL8 3843 aa-0.07□□□□□ -2.42
SCARNA21.1-201ENST00000515996 TACC2O95359 2948 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms