RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 PPP1R13LQ8WUF5 828 aa16.52■□□□□ 0.24
THUMPD3-210ENST00000515662 FAM49AQ9H0Q0 323 aaPredicted RBP16.52■□□□□ 0.24
THUMPD3-210ENST00000515662 Q9Y3F1 56 aa16.52■□□□□ 0.24
THUMPD3-210ENST00000515662 A0A1B0GUA9 196 aa16.52■□□□□ 0.23
THUMPD3-210ENST00000515662 DDX3YO15523 660 aaKnown RBP16.52■□□□□ 0.23
THUMPD3-210ENST00000515662 ATP8B1O43520 1251 aa16.52■□□□□ 0.23
THUMPD3-210ENST00000515662 TBC1D8O95759 1140 aa16.52■□□□□ 0.23
THUMPD3-210ENST00000515662 CYP1A1P04798 512 aaPredicted RBP16.52■□□□□ 0.23
THUMPD3-210ENST00000515662 NFICP08651 508 aa16.52■□□□□ 0.23
THUMPD3-210ENST00000515662 MCM3P25205 808 aa16.52■□□□□ 0.23
THUMPD3-210ENST00000515662 GNA15P30679 374 aa16.52■□□□□ 0.23
THUMPD3-210ENST00000515662 CPT1AP50416 773 aa16.52■□□□□ 0.23
THUMPD3-210ENST00000515662 NUP85Q9BW27 656 aa16.52■□□□□ 0.23
THUMPD3-210ENST00000515662 AP5M1Q9H0R1 490 aa16.52■□□□□ 0.23
THUMPD3-210ENST00000515662 ALG6Q9Y672 507 aa16.52■□□□□ 0.23
THUMPD3-210ENST00000515662 HAS3O00219 553 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 PLA2G4AP47712 749 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 TM4SF4P48230 202 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 PSEN2P49810 448 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 ZNF699Q32M78 642 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 RASGEF1CQ8N431 466 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 HDAC7Q8WUI4 952 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 ZIC5Q96T25 663 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 UVRAGQ9P2Y5 699 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 SIX4Q9UIU6 781 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 TMEM59LQ9UK28 342 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 GPR32O75388 356 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 CFHP08603 1231 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 CDC42EP1Q00587 391 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 TMEM62Q0P6H9 643 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 HIC1Q14526 733 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 SLC10A6Q3KNW5 377 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 JADE1Q6IE81 842 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 TRIM72Q6ZMU5 477 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 MCOLN2Q8IZK6 566 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 ZNF564Q8TBZ8 553 aaPredicted RBP16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 CPA5Q8WXQ8 436 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 CYFIP2Q96F07 1278 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 FUT8Q9BYC5 575 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 ASB7Q9H672 318 aa16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 CNOT8Q9UFF9 292 aaKnown RBP16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 ABT1Q9ULW3 272 aaKnown RBP16.51■□□□□ 0.23
THUMPD3-210ENST00000515662 MGAMO43451 1857 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 SMIM35A0A1B0GVV1 85 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 PGRMC1O00264 195 aaKnown RBP16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 ZMYND10O75800 440 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 FGFR4P22455 802 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 ASPAP45381 313 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 ADAM17P78536 824 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 BEX3Q00994 111 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 CENPCQ03188 943 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 NAA35Q5VZE5 725 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 RUFY4Q6ZNE9 571 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 C1orf127Q8N9H9 656 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.5■□□□□ 0.234e-6■■■□□ 14.6
THUMPD3-210ENST00000515662 GCOM2Q9BZD3 368 aaPredicted RBP16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 CISHQ9NSE2 258 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 KAT6AQ92794 2004 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 THAP12O43422 761 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 CA12O43570 354 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 SASH3O75995 380 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 MYL3P08590 195 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 CYP2C9P11712 490 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 MESDQ14696 234 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 GLE1Q53GS7 698 aaKnown RBP16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 RUBCNQ92622 972 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 RPS6KC1Q96S38 1066 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 ADPGKQ9BRR6 497 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 CDHR5Q9HBB8 845 aa16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 DMGDHQ9UI17 866 aaKnown RBP16.5■□□□□ 0.23
THUMPD3-210ENST00000515662 DCAF8L1A6NGE4 600 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 ERICH4A6NGS2 130 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 TMEM110-MUSTN1A8MSY1 372 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 KRT19P08727 400 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 CD58P19256 250 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 NSFP46459 744 aaKnown RBP16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 MRPS25P82663 173 aaKnown RBP16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 DCAF12L1Q5VU92 463 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 SMYD5Q6GMV2 418 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 C8orf74Q6P047 294 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 TRIM11Q96F44 468 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 AVENQ9NQS1 362 aaPredicted RBP16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 TTC7AQ9ULT0 858 aaPredicted RBP16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 L1RE1Q9UN81 338 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 GINS2Q9Y248 185 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 NOC2LQ9Y3T9 749 aaKnown RBP16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 MIF4GDA9UHW6 222 aaKnown RBP16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 WEE2P0C1S8 567 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 MYBL1P10243 752 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 COMTP21964 271 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 HOXA11P31270 313 aaPredicted RBP16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 NOMO3P69849 1222 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 MON1BQ7L1V2 547 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 PASD1Q8IV76 773 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 CXorf38Q8TB03 319 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 ACAP3Q96P50 834 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 CARD9Q9H257 536 aa16.49■□□□□ 0.23
THUMPD3-210ENST00000515662 MROH7Q68CQ1 1323 aa16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 SSTR3P32745 418 aaPredicted RBP16.48■□□□□ 0.23
THUMPD3-210ENST00000515662 GRM5P41594 1212 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms