RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 ZACNQ401N2 412 aa6.17□□□□□ -1.42
RFC1-216ENST00000514572 CCDC93Q567U6 631 aa6.17□□□□□ -1.42
RFC1-216ENST00000514572 FAM47AQ5JRC9 791 aa6.17□□□□□ -1.42
RFC1-216ENST00000514572 ZNF783Q6ZMS7 281 aa6.17□□□□□ -1.42
RFC1-216ENST00000514572 PAF1Q8N7H5 531 aa6.17□□□□□ -1.42
RFC1-216ENST00000514572 MDM1Q8TC05 714 aa6.17□□□□□ -1.42
RFC1-216ENST00000514572 TRAPPC12Q8WVT3 735 aa6.17□□□□□ -1.42
RFC1-216ENST00000514572 TBC1D20Q96BZ9 403 aa6.17□□□□□ -1.42
RFC1-216ENST00000514572 TBATAQ96M53 351 aa6.17□□□□□ -1.42
RFC1-216ENST00000514572 ZNF518BQ9C0D4 1074 aa6.17□□□□□ -1.42
RFC1-216ENST00000514572 OR10A2Q9H208 303 aa6.17□□□□□ -1.42
RFC1-216ENST00000514572 MAGEH1Q9H213 219 aa6.17□□□□□ -1.42
RFC1-216ENST00000514572 MOCS1Q9NZB8 636 aa6.17□□□□□ -1.42
RFC1-216ENST00000514572 SRRDQ9UH36 339 aa6.17□□□□□ -1.42
RFC1-216ENST00000514572 RBM8AQ9Y5S9 174 aaKnown RBP6.17□□□□□ -1.42
RFC1-216ENST00000514572 A0A087WWL8 130 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 ACKR2O00590 384 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 ARHGAP6O43182 974 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 SLC26A4O43511 780 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 SLC43A1O75387 559 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 ZNF888P0CJ79 500 aaPredicted RBP6.16□□□□□ -1.42
RFC1-216ENST00000514572 PTPN7P35236 360 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 MEOX1P50221 254 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 SLC13A2Q13183 592 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 PFKFB4Q16877 469 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 SPTY2D1Q68D10 685 aaPredicted RBP6.16□□□□□ -1.42
RFC1-216ENST00000514572 PDZD4Q76G19 769 aaPredicted RBP6.16□□□□□ -1.42
RFC1-216ENST00000514572 BEND5Q7L4P6 421 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 PCGF5Q86SE9 256 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 TMEFF1Q8IYR6 380 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 FNIP1Q8TF40 1166 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 ZNF384Q8TF68 577 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 GCDHQ92947 438 aaPredicted RBP6.16□□□□□ -1.42
RFC1-216ENST00000514572 TNPO1Q92973 898 aaKnown RBP6.16□□□□□ -1.42
RFC1-216ENST00000514572 ZNF566Q969W8 418 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 NELL2Q99435 816 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 NDC1Q9BTX1 674 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 CARD11Q9BXL7 1154 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 SLC6A15Q9H2J7 730 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 JADE2Q9NQC1 790 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.16□□□□□ -1.42
RFC1-216ENST00000514572 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.16□□□□□ -1.42
RFC1-216ENST00000514572 PDP2Q9P2J9 529 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 SLC39A10Q9ULF5 831 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 MAGED2Q9UNF1 606 aaPredicted RBP6.16□□□□□ -1.42
RFC1-216ENST00000514572 RUVBL1Q9Y265 456 aaKnown RBP6.16□□□□□ -1.42
RFC1-216ENST00000514572 LRRFIP2Q9Y608 721 aaKnown RBP6.16□□□□□ -1.42
RFC1-216ENST00000514572 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.16□□□□□ -1.42
RFC1-216ENST00000514572 CARMIL2Q6F5E8 1435 aa6.16□□□□□ -1.42
RFC1-216ENST00000514572 CUX2O14529 1486 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 A0A1B0GVC2 190 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 MBD3L4A6NDZ8 208 aaPredicted RBP6.15□□□□□ -1.42
RFC1-216ENST00000514572 MBD3L3A6NE82 208 aaPredicted RBP6.15□□□□□ -1.42
RFC1-216ENST00000514572 PRRT4C9JH25 899 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 BIN1O00499 593 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 HNRNPDLO14979 420 aaKnown RBP6.15□□□□□ -1.42
RFC1-216ENST00000514572 AREL1O15033 823 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 DNAJB5O75953 348 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 DHRS4L1P0CG22 281 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 SERPINF1P36955 418 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 HABP2Q14520 560 aaPredicted RBP6.15□□□□□ -1.42
RFC1-216ENST00000514572 TBR1Q16650 682 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 CYP26C1Q6V0L0 522 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 PDSS2Q86YH6 399 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 VGLL2Q8N8G2 317 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 MYOCQ99972 504 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 SGPP1Q9BX95 441 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 EIF2AQ9BY44 585 aaKnown RBP6.15□□□□□ -1.42
RFC1-216ENST00000514572 EPB41L4BQ9H329 900 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 AS3MTQ9HBK9 375 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 GPR35Q9HC97 309 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 TM7SF3Q9NS93 570 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 FAM30AQ9NZY2 134 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 ADAM29Q9UKF5 820 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 MAN2B2Q9Y2E5 1009 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 OAS3Q9Y6K5 1087 aaKnown RBP6.15□□□□□ -1.42
RFC1-216ENST00000514572 PMF1-BGLAPU3KQ54 211 aa6.15□□□□□ -1.42
RFC1-216ENST00000514572 ZMYM3Q14202 1370 aa6.15□□□□□ -1.43
RFC1-216ENST00000514572 A0A087WZ62 844 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 LGALS16A8MUM7 142 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 CXorf49A8MYA2 514 aaPredicted RBP6.14□□□□□ -1.43
RFC1-216ENST00000514572 NCAM2O15394 837 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 THAP12O43422 761 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 CNOT4O95628 575 aaKnown RBP6.14□□□□□ -1.43
RFC1-216ENST00000514572 RARBP10826 455 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 MTHFD1P11586 935 aaKnown RBP6.14□□□□□ -1.43
RFC1-216ENST00000514572 KLRC1P26715 233 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 CASRP41180 1078 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 BPIFB4P59827 614 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 CTBP1Q13363 440 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 NFYCQ13952 458 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 VWA3BQ502W6 1294 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 FKBP15Q5T1M5 1219 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 LIN54Q6MZP7 749 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 ZNF365Q70YC5 407 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 ADGRE4PQ86SQ3 457 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 TXLNBQ8N3L3 684 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 NME8Q8N427 588 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 OR56A3Q8NH54 315 aa6.14□□□□□ -1.43
RFC1-216ENST00000514572 GPHA2Q96T91 129 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms