RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 RNF31Q96EP0 1072 aa6.85□□□□□ -1.31
CHD1-209ENST00000512844 PUS7Q96PZ0 661 aaKnown RBP6.85□□□□□ -1.31
CHD1-209ENST00000512844 ZNF768Q9H5H4 540 aaKnown RBP6.85□□□□□ -1.31
CHD1-209ENST00000512844 MMRN2Q9H8L6 949 aa6.85□□□□□ -1.31
CHD1-209ENST00000512844 BRD9Q9H8M2 597 aa6.85□□□□□ -1.31
CHD1-209ENST00000512844 KLHL11Q9NVR0 708 aa6.85□□□□□ -1.31
CHD1-209ENST00000512844 GOLGA6AQ9NYA3 693 aa6.85□□□□□ -1.31
CHD1-209ENST00000512844 SRRDQ9UH36 339 aa6.85□□□□□ -1.31
CHD1-209ENST00000512844 SLC43A1O75387 559 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 AGFG2O95081 481 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 ANXA1P04083 346 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 GNAI2P04899 355 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 PIK3CGP48736 1102 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 MAP2K6P52564 334 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 GUCY1B3Q02153 619 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 PIGFQ07326 219 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 ZNF844Q08AG5 666 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 SNAPC2Q13487 334 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 NFE2Q16621 373 aaPredicted RBP6.84□□□□□ -1.31
CHD1-209ENST00000512844 MINDY4Q4G0A6 757 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 CCDC93Q567U6 631 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 DENND1CQ8IV53 801 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 CPEB3Q8NE35 698 aaKnown RBP6.84□□□□□ -1.31
CHD1-209ENST00000512844 BRIX1Q8TDN6 353 aaKnown RBP6.84□□□□□ -1.31
CHD1-209ENST00000512844 LENG9Q96B70 501 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 MYEOVQ96EZ4 313 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 SIK2Q9H0K1 926 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 CDYLQ9Y232 598 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 STXBP5LQ9Y2K9 1186 aa6.84□□□□□ -1.31
CHD1-209ENST00000512844 F2RL2O00254 374 aa6.83□□□□□ -1.32
CHD1-209ENST00000512844 MARCH6O60337 910 aa6.83□□□□□ -1.32
CHD1-209ENST00000512844 FSHBP01225 129 aa6.83□□□□□ -1.32
CHD1-209ENST00000512844 HSD11B2P80365 405 aa6.83□□□□□ -1.32
CHD1-209ENST00000512844 RESTQ13127 1097 aa6.83□□□□□ -1.32
CHD1-209ENST00000512844 ZNF267Q14586 743 aaPredicted RBP6.83□□□□□ -1.32
CHD1-209ENST00000512844 FAM102BQ5T8I3 360 aa6.83□□□□□ -1.32
CHD1-209ENST00000512844 PPP4R4Q6NUP7 873 aa6.83□□□□□ -1.32
CHD1-209ENST00000512844 DIS3LQ8TF46 1054 aaKnown RBP6.83□□□□□ -1.32
CHD1-209ENST00000512844 TNPO1Q92973 898 aaKnown RBP6.83□□□□□ -1.32
CHD1-209ENST00000512844 MARS2Q96GW9 593 aaKnown RBP6.83□□□□□ -1.32
CHD1-209ENST00000512844 MED15Q96RN5 788 aa6.83□□□□□ -1.32
CHD1-209ENST00000512844 ZSWIM1Q9BR11 485 aa6.83□□□□□ -1.32
CHD1-209ENST00000512844 IMPG2Q9BZV3 1241 aa6.83□□□□□ -1.32
CHD1-209ENST00000512844 SARS2Q9NP81 518 aaKnown RBP6.83□□□□□ -1.32
CHD1-209ENST00000512844 PNPOQ9NVS9 261 aa6.83□□□□□ -1.32
CHD1-209ENST00000512844 RLIMQ9NVW2 624 aa6.83□□□□□ -1.32
CHD1-209ENST00000512844 NR2E3Q9Y5X4 410 aa6.83□□□□□ -1.32
CHD1-209ENST00000512844 CDKL5O76039 1030 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 FOSP01100 380 aaPredicted RBP6.82□□□□□ -1.32
CHD1-209ENST00000512844 CFIP05156 583 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 SBK3P0C264 359 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 FGFR4P22455 802 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 BMPR1AP36894 532 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 FXR1P51114 621 aaKnown RBP eCLIP6.82□□□□□ -1.32
CHD1-209ENST00000512844 NOMO3P69849 1222 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 FAM189BP81408 668 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 BEAN1Q3B7T3 259 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 NOMO2Q5JPE7 1267 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 DAAM2Q86T65 1068 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 RAVER1Q8IY67 606 aaKnown RBP6.82□□□□□ -1.32
CHD1-209ENST00000512844 MYO1HQ8N1T3 1032 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 FAM43AQ8N2R8 423 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 SLC17A8Q8NDX2 589 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 NEU4Q8WWR8 484 aaPredicted RBP6.82□□□□□ -1.32
CHD1-209ENST00000512844 DMRTA2Q96SC8 542 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 NEU1Q99519 415 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 ALOXE3Q9BYJ1 711 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 KRTAP17-1Q9BYP8 105 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 KLHL42Q9P2K6 505 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 KCNE5Q9UJ90 142 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 MAP3K2Q9Y2U5 619 aa6.82□□□□□ -1.32
CHD1-209ENST00000512844 ERC2O15083 957 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 TSPAN6O43657 245 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 NARSO43776 548 aaKnown RBP6.81□□□□□ -1.32
CHD1-209ENST00000512844 CTNND1O60716 968 aaKnown RBP6.81□□□□□ -1.32
CHD1-209ENST00000512844 GJB1P08034 283 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 TYRP14679 529 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 PSMC1P62191 440 aaKnown RBP6.81□□□□□ -1.32
CHD1-209ENST00000512844 OCA2Q04671 838 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 MLC1Q15049 377 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 PREPLQ4J6C6 727 aaPredicted RBP6.81□□□□□ -1.32
CHD1-209ENST00000512844 ARHGAP29Q52LW3 1261 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 ZFPM1Q8IX07 1006 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 COLGALT2Q8IYK4 626 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 TMEM132CQ8N3T6 1108 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 LCORLQ8N3X6 602 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 SLC35G2Q8TBE7 412 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 SLC35A4Q96G79 324 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 CGRRF1Q99675 332 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 TEX101Q9BY14 249 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 KRTAP9-3Q9BYQ3 159 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 SLC12A5Q9H2X9 1139 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 GALNT9Q9HCQ5 603 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 GPRC5BQ9NZH0 403 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 TESQ9UGI8 421 aaKnown RBP6.81□□□□□ -1.32
CHD1-209ENST00000512844 NEU2Q9Y3R4 380 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 AATKQ6ZMQ8 1374 aa6.81□□□□□ -1.32
CHD1-209ENST00000512844 ZNF785A8K8V0 405 aa6.8□□□□□ -1.32
CHD1-209ENST00000512844 H3BML4 177 aa6.8□□□□□ -1.32
CHD1-209ENST00000512844 FCER1AP12319 257 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms