RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 hCG_1809904A0A1W2PP81 198 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 A0A1W2PPE2 198 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 A0A1W2PR64 198 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 HNRNPCL3B7ZW38 293 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 SEC22BO75396 215 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 THP07101 528 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 HNRNPCL4P0DMR1 293 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 RFC1P35251 1148 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 IFNAR2P48551 515 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 UBE3AQ05086 875 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 GALNT2Q10471 571 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 FAM98CQ17RN3 349 aaKnown RBP6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 C3orf36Q3SXR2 165 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 USP53Q70EK8 1073 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 VASH1Q7L8A9 365 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 KIF18BQ86Y91 864 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 SP8Q8IXZ3 490 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 C17orf53Q8N3J3 647 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 AFAP1Q8N556 730 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 TBC1D22AQ8WUA7 517 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 RUBCNQ92622 972 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 ZNF566Q969W8 418 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 ZBTB9Q96C00 473 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 SLC6A18Q96N87 628 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 PACSIN1Q9BY11 444 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 DNAJC18Q9H819 358 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 SNTG1Q9NSN8 517 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 STK32BQ9NY57 414 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 TMED5Q9Y3A6 229 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 PSAT1Q9Y617 370 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 DIP2BQ9P265 1576 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 SPAG9O60271 1321 aaKnown RBP6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 PRR36Q9H6K5 1346 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 SH2B2O14492 632 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 IKBKBO14920 756 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 ZNF254O75437 659 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 PALMO75781 387 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 PRLRP16471 622 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 PSMC4P43686 418 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 MECP2P51608 486 aaKnown RBP6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 ARSDP51689 593 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 ZNF445P59923 1031 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 RAB1AP62820 205 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 SH3BP2P78314 561 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 DEUP1Q05D60 604 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 BFSP1Q12934 665 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 SLC12A1Q13621 1099 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 KYNUQ16719 465 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 TMEM177Q53S58 311 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 DCAF17Q5H9S7 520 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 SPDYCQ5MJ68 293 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 NAA16Q6N069 864 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 GPR153Q6NV75 609 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 CLEC2AQ6UVW9 174 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 ZYG11AQ6WRX3 759 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 C3orf67Q6ZVT6 689 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 TSPYL5Q86VY4 417 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 TSPYL6Q8N831 410 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 SPERTQ8NA61 448 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 AUTS2Q8WXX7 1259 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 RTF1Q92541 710 aaKnown RBP6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 MTMR12Q9C0I1 747 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 CD93Q9NPY3 652 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 CHMP5Q9NZZ3 219 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 B4GALT6Q9UBX8 382 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 NAALADL1Q9UQQ1 740 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 SLC4A4Q9Y6R1 1079 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 FAM169AQ9Y6X4 670 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 NEO1Q92859 1461 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 WDR19Q8NEZ3 1342 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 A8MV72 311 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 H7BY64 318 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 SLC25A17O43808 307 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 TLL1O43897 1013 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 SYNCRIPO60506 623 aaKnown RBP6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 TSC22D2O75157 780 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 LRG1P02750 347 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 NR2F1P10589 423 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 FSHRP23945 695 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 ALDH1B1P30837 517 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 HTD2P86397 168 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 NEUROD1Q13562 356 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 SNX17Q15036 470 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 HFEQ30201 348 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 LRRFIP1Q32MZ4 808 aaKnown RBP6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 MSS51Q4VC12 460 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 RRAGBQ5VZM2 374 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 FDX2Q6P4F2 183 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 DHX32Q7L7V1 743 aaKnown RBP6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 BTLAQ7Z6A9 289 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 TMEM110Q86TL2 294 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 TXLNBQ8N3L3 684 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 OTUD7AQ8TE49 926 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 BRI3BPQ8WY22 251 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 NCSTNQ92542 709 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 MRGPRX3Q96LB0 322 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 ABHD1Q96SE0 405 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 ATP6V0BQ99437 205 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 SPSB2Q99619 263 aa6.78□□□□□ -1.32
TRAPPC11-209ENST00000512476 PHF20Q9BVI0 1012 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms